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Protein Overview: Pof-PB, Pof-PA, ...

General Information:
Name(s) found: FBpp0297610 [FlyBase]
Pof-PA / FBpp0072235 [FlyBase]
Pof-PB / FBpp0072234 [FlyBase]
Description(s) found:
Found 45 descriptions.
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  • type=protein; loc=2R:join(20557094..20557370,20557425..20558309,20558371..20558562,20558621..20558754); ID=FBpp0297610; name=Pof-PC; parent=FBgn0035047,FBtr0306655; dbxref=REFSEQ:NP_001246498,GB_protein:AFH08251,FlyBase:FBpp0297610,FlyBase_Annotation_IDs:CG3691-PC; MD5=ab59ae2e92923c6070367bc036ef599b; length=495; release=r5.56; species=Dmel; [FlyBase]
  • The gene Painting of fourth is referred to in FlyBase by the symbol Dmel\Pof (CG3691, FBgn0035047). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20556901..20559041. It has the cytological map location 60D13. There is experimental evidence that it has the molecular function</span>: protein binding; chromatin binding. The biological processes in which it is involved are not known. 29 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene Painting of fourth is referred to in FlyBase by the symbol Dmel\Pof (CG3691, FBgn0035047). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20556901..20559041. It has the cytological map location 60D13. There is experimental evidence that it has the molecular function</span>: protein binding; chromatin binding. The biological processes in which it is involved are not known. 29 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 495 amino acids

    Gene Ontology:
    Cellular Component: autosome [IDA]
    chromosome [IDA][NAS]
    Biological Process: biological_process [ND]
    Molecular Function: protein binding [IPI]
    mRNA binding [ISS]
    chromatin binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKRAALES GDGPDAKRLD TTDDQDKEAS GGDGSQVMLA KHVAPYTGHG CTPPMESYLF  60
   61 EPTPAGSQLL PWKTSVDLDN DAELEKPTSD KKPDTAKLSR RELAKMRREH TLRALALERE 120
  121 LTNKPGQTPA SEVLLVRFPD PEITAPMLAG LSKDIRDVVL PISVAPRYCL VHLKAGADVE 180
  181 ATICDINRVR FGTGHLRAEL KPFSDEEQAE FIDPCSLYVG NIPFNMTTSA IKAYFANAMR 240
  241 VDIGVLKREK RARYAFVRYA SPDQTMEAFK ELVDSPLNSR TLTVRYRRLR KRAGMPMVQC 300
  301 ATSFQALQSP NGDDDNTDCK VISPPPLESI IISDSDNCSD SSGNGKEDGK RKKKINEQER 360
  361 EIEKLKRQMA EYGAIIKSLQ FRQNSLEDTF IPDLTPKVEP SVNPTGCLLG SNAVHLMRDI 420
  421 KKECDYLGIP DPVPATKPTT QAQDDSQKKA KRSCFGRLFT GPFRRGTSAM KTADEYEKDD 480
  481 RLEELYAQLE RDPDP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..428] PSI-BLAST 19.154902 No description for 2ghpA was found.
    3 View Details [429..495] PSI-BLAST 3.69897 poly(A) binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.86107895330648 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.24926911925075 bayes_pls_golite062009
  • RNA binding
    		•  0.869777833004299 bayes_pls_golite062009
  • protein binding
    		•  0.0101134374085809 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle