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View Structure Prediction Details

Protein: uri-PA
Organism: Drosophila melanogaster
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for uri-PA.

Description E-value Query
Range
Subject
Range
gi|109488222 - gi|109488222|ref|XP_001077587.1| PREDICTED: similar to Myosin heavy chain, skeletal muscle, adult 2 ...
248.0 [0..2] [731..1347]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRREDALLQ ALQTNASETE RWEAFKRDNE STIRNLDKFA KNLSVEVMVP IGRKALMPGE  60
   61 LIHTNELLVG HYEGYFSACS SHKAKEICQY RLKLAEEQLK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.2
Match: 1fxkC
Description: Prefoldin alpha subunit
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [101-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLAVENDLWQ KKLHTPFAEG AVPSGDQVEI VEDFNEESHN KWLAEHRKRM RQQKQKERLE  60
   61 REAEPVKKDN EVLRKLEERE MMEELGLDPD NIDEDQLHDM LNQEPLKSTN ESSPKSLTQE 120
  121 EEDELWKKLE AEEQNEADEL SSEAEESLKT TDNLVRQLMS GETETPSSKK RTAGTNRNVE 180
  181 IQDPISEDDG DDDDEGDQEE EVRTIREQMS LLPNEDREPF LRAQLHVLKA KMRKIQKVNF 240
  241 ISDELIHLMN VVVMLEDDLQ DLVFEQELEA SEEEEEVVEN NHLPDEPSKE LSTVSESSTN 300
  301 KRRISFALDD EKLEFRREET VAEMLPNAKK NSRDIIKLNA PLKPAGDPQP ASIKTKRQTT 360
  361 QDILQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [467-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VERNIEFVKE NQSVQDFDLL NRIMEESTGL INTLHISFTH SGAIPSPSSD QSDGIPGKPS  60
   61 DFYVRYEKDR ARPNDSFPIY VNGFEGEEHV KVPIMSEAAR GSAYEDPRSQ FSKPNSSEIC 120
  121 FTHSGSITPT SNDQSDDIPG NPFDFYEKYE KDRAKFSKSN SSEGDATDPE SATKSILRNK 180
  181 SAVDLEPHNV NQQPKKGRKV RNQKKKERTL DDDLRDMSAY QKVMHDLVEK EPTAPEPLPP 240
  241 GKFIDSHAPK KRVSRFKEQR ALNKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle