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View Structure Prediction Details

Protein: CG3419-PA
Organism: Drosophila melanogaster
Length: 830 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3419-PA.

Description E-value Query
Range
Subject
Range
gi|220950382 - gi|220950382|gb|ACL87734.1| CG3419-PB [synthetic construct]
FBpp0310802 - type=protein; loc=2R:join(20299486..20299642,20299701..20301634); ID=FBpp0310802; name=CG45068-PA; p...
573.0 [0..1] [695..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTTLWQNR SPGDRHLSTY FCFAAVRLLL VFVPQLGYVH PDEFFQSVEV MTGDHFRLEH  60
   61 TRTWEFNNSL PVRSIVLPFA LLRIPWSFYE FVAECLKAWW QLELLGTYAY VVFPRLIYTL 120
  121 ISFSNDYCLF RICRLYGLRF EIRLLAMGSS WILLVFGTRT FSNSLEMAMC SWLLCLVSEC 180
  181 MLRTNTVVYK KEFLEEKYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAESISERVR IWKLKNSLPA HNLQHLMAMS TICVAGVFNR PTFLLFGAPM VFFWLLRGMG  60
   61 TRSITFRDFN LRIALFCLCA LPALVLFIFC DSLYYQHLTL GELHMMHLSI DNFVFTPWNF 120
  121 IKANLDSAQT ASHGVHPCYV HLMVNMPMLF NVLALASLGA FAQLLLRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [368-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRAEYQVLPR FQSIVSLMSG AIFVPLFFLS LINHQEPRFL LPVTFPLILL HAPKLITGFS  60
   61 AKYPFQKDHP LLRLFYDKLL SSKASGPYLL KIWYVSNVAL TLFFGFIHQA GVYPLAADIS 120
  121 HVIATKPAAT HVHLITSHIY SLPLHLINIP SSRVLHFNRL THQRYRRPRD FYMYEYGGLP 180
  181 LDSLLQKVKL ISGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [562-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CEVKKSGPSR RRYKLYLAIP ASLSADLHEA LVHSNASSYL NFELLKVFYP HLSTEAFPHL  60
   61 QGRHPCDVDA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [632-830]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHWAHDDLRG TCSAEQLPAF SFAYLNKQFS SFVHQLGLAL YEIDVTRNKP RYVSLAYSGC  60
   61 SPTKGYFLLF IQFLICLALC IAAAQAGFIA SPVTTYAAAP AYAASYAAPV AYSAPVATYA 120
  121 AAAPAYSTYA AAAPAYSTYA AAAPAYSTYA AAAPAYTASV YSAPAYTAPV TTYAAGAAYA 180
  181 APVTTYSAPA IVSPILKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle