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View Structure Prediction Details

Protein: CG3419-PA
Organism: Drosophila melanogaster
Length: 830 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3419-PA.

Description E-value Query
Range
Subject
Range
gi|220950382 - gi|220950382|gb|ACL87734.1| CG3419-PB [synthetic construct]
FBpp0310802 - type=protein; loc=2R:join(20299486..20299642,20299701..20301634); ID=FBpp0310802; name=CG45068-PA; p...
573.0 [0..1] [695..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTTLWQNR SPGDRHLSTY FCFAAVRLLL VFVPQLGYVH PDEFFQSVEV MTGDHFRLEH  60
   61 TRTWEFNNSL PVRSIVLPFA LLRIPWSFYE FVAECLKAWW QLELLGTYAY VVFPRLIYTL 120
  121 ISFSNDYCLF RICRLYGLRF EIRLLAMGSS WILLVFGTRT FSNSLEMAMC SWLLCLVSEC 180
  181 MLRTNTVVYK KEFLEEKYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAESISERVR IWKLKNSLPA HNLQHLMAMS TICVAGVFNR PTFLLFGAPM VFFWLLRGMG  60
   61 TRSITFRDFN LRIALFCLCA LPALVLFIFC DSLYYQHLTL GELHMMHLSI DNFVFTPWNF 120
  121 IKANLDSAQT ASHGVHPCYV HLMVNMPMLF NVLALASLGA FAQLLLRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [368-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRAEYQVLPR FQSIVSLMSG AIFVPLFFLS LINHQEPRFL LPVTFPLILL HAPKLITGFS  60
   61 AKYPFQKDHP LLRLFYDKLL SSKASGPYLL KIWYVSNVAL TLFFGFIHQA GVYPLAADIS 120
  121 HVIATKPAAT HVHLITSHIY SLPLHLINIP SSRVLHFNRL THQRYRRPRD FYMYEYGGLP 180
  181 LDSLLQKVKL ISGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [562-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CEVKKSGPSR RRYKLYLAIP ASLSADLHEA LVHSNASSYL NFELLKVFYP HLSTEAFPHL  60
   61 QGRHPCDVDA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [632-830]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHWAHDDLRG TCSAEQLPAF SFAYLNKQFS SFVHQLGLAL YEIDVTRNKP RYVSLAYSGC  60
   61 SPTKGYFLLF IQFLICLALC IAAAQAGFIA SPVTTYAAAP AYAASYAAPV AYSAPVATYA 120
  121 AAAPAYSTYA AAAPAYSTYA AAAPAYSTYA AAAPAYTASV YSAPAYTAPV TTYAAGAAYA 180
  181 APVTTYSAPA IVSPILKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle