| Protein: | tamo-PA, tamo-PB... |
| Organism: | Drosophila melanogaster |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tamo-PA, tamo-PB....
| Description | E-value | Query Range |
Subject Range |
|
|
456.0 | [0..1] | [770..1] |
|
Region A: Residues: [1-278] |
1 11 21 31 41 51
| | | | | |
1 MSDFVPHDLI PDLWDEILRR HWMFLETEES IEKLEERKQL EGCLKEFLCV VQHDRKFFLP 60
61 ETGHVLRRSV LELPDFSAQN AIVAFETISQ YANNLFTKPW RKEYRTLKTY SGCFQHDIQS 120
121 RLLDAEQLFL AMGYRRAAED TFVLEGPICP DQVTNVSRDA MAAYVECQIM KHIYAGVTAA 180
181 GYVCTWKDIL QFRERYVGGT STTIKEMVRQ LSEKRVRMEQ PPMQENTYSN VVSAAPTACG 240
241 MRSNNVAHHP SSSGTCALHP NGLNEAGKYL PPYPAPPP
|
| Detection Method: |  |
| Confidence: | 38.39794 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [279-357] |
1 11 21 31 41 51
| | | | | |
1 QQPHLPGPLM THSRSLDHYQ EPQAHLPHRH SFDQQLQQQC QLPHVYEAPY DCLDGLSMGS 60
61 SASYAAVTGA YNAPGNRYP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [358-523] |
1 11 21 31 41 51
| | | | | |
1 LPYNISSQLN APYASPADFY GNGQHTNMYA TLGKTGPAHS CDLHRRQPNT SAAAAAALAA 60
61 MQHRQSTYPP DHHLIDFDER AHLTQHDFGT HDYDPQYAEL RGQVQPSMRG NPVAMYATYG 120
121 GYDLPTTLPQ APPPTGQDMY IYARPVPKSS RMRALAEAGG INSTDK
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [524-651] |
1 11 21 31 41 51
| | | | | |
1 HPRSAEKQST MDNNRKMHKE LKERNSRTAP AKRSGTERDI PTTISDLNSY DSASLDGFVA 60
61 LDSSSSPPLM PKVQEGVGSF ESWNYVFKNL ERSGYTKDLG DREDLLVQSL DLGSLSITNG 120
121 GAAPPAEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [652-797] |
1 11 21 31 41 51
| | | | | |
1 RREATNPTNG EKARTLDKKS GTGRREAKVV QAPAPSPLPN SSSAGVKKVK SALKTAVVDN 60
61 RGTGSRQRTG AVPKQPPNVS PQLIVTSPNE WSCSFCTFLN PDTKRICEMC CRSKDFNLEA 120
121 ASAASSSAAA AAASAASVSH ASSTCV
|
| Detection Method: | |
| Confidence: | 1.46 |
| Match: | 1w7pD |
| Description: | ESCRT-II |
Matching Structure (courtesy of the PDB): |
|
