| Protein: | MAN1-PB, MAN1-PA... |
| Organism: | Drosophila melanogaster |
| Length: | 650 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAN1-PB, MAN1-PA....
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..15] | [650..15] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MSTESLNSLS DKELHRKLIQ SGFPSTPVTE TTRAVLIEKL RKHTRADKLK KRSNKYVLY
|
| Detection Method: |  |
| Confidence: | 4.09691 |
| Match: | 1jeiA |
| Description: | Inner nuclear membrane protein emerin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [60-236] |
1 11 21 31 41 51
| | | | | |
1 SKEQQESPPF PQYHQYHAPQ PPQNYANGLD NNNDLDQTGG SSAYNRSLDE SDSSPLQLSA 60
61 SKMYAPPPVV ASNYDGDCSP HSLGLNGKYL QPCSMPYAID TSNNYGKPSG KAKLSDGGVV 120
121 NRLLSFRDTT IQRKFNYPTG QASRIPLRKE RLTRFALSDL KSFIRNPDIR PYVIPRV
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [237-390] |
1 11 21 31 41 51
| | | | | |
1 LISLFLIFLT IITVLYVGKR FEQSPIDKAA LKYTLCNPND MQMISEKVNC IEKDSLRGAL 60
61 DMSEELFRHL NERARLHHCK DANLSPALEI GEFVREMVSN PKTHRGNLHS NLMAAKYLIT 120
121 ENPQWSIQVV DSTKHLGQTS HFELSEPNLP LKCI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-526] |
1 11 21 31 41 51
| | | | | |
1 VLKKVTRFFT VIGALLLIVA GFLIVYVAVV IYRVKQKEAL LAVDQFQKDI INELIYLSSQ 60
61 SESPEVVINQ LQEKFLPAKK RSKLLSSWNK ALKQLEKNDS RVLFGMVNRD GKAMRTIAWN 120
121 RNVDKKDVGL VKKWQS
|
| Detection Method: | |
| Confidence: | 21.045757 |
| Match: | 2ch0A |
| Description: | No description for 2ch0A was found. |
|
Region A: Residues: [527-650] |
1 11 21 31 41 51
| | | | | |
1 PAFDNSNKIA NPPTPCLKIR HMFDSSEVDQ ANLKQSIVES IIEKVGTRCK ICDVQLDVQS 60
61 CCVYIRCASE EDAGTIHKEI NGWWFDKRLI SIKFLRLERY LSRFPKPSAE PLYFHTNEAA 120
121 NTHS
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 2pe8A |
| Description: | No description for 2pe8A was found. |
