| Protein: | alpha-catenin-re... |
| Organism: | Drosophila melanogaster |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alpha-catenin-re....
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..7] | [787..32] |
|
Region A: Residues: [1-587] |
1 11 21 31 41 51
| | | | | |
1 MYGITQSTVN NQRFRVRDMD NEQIMSTFGN IGHLLNIAVE RFITIGEIIA EENIDIKGDM 60
61 YEAAKEARDA GKSIERLCDI SPLSGMELRH HIEPLKDYGA IILAARSLLS SVTRILLLVD 120
121 IIVVKKLLTA KKRASESLEK LESVMNFTEF VRAFSVFGTE MIELAYLTGH HRNSFKEERR 180
181 RAQMFSARQI LEKSIAILLT SSKNSLIHSD CVIVKENRDT VFCQIRRAMD LIHFVVKDSI 240
241 FDTAKHMPFE KQASNPNYEN ESIYTTIKRI VNLIKRYKYQ MSYYEGSGEG NNNSDAYFSF 300
301 LDDDLWKSEK NLPSAAGGGR MVNNTNFRKH LSSESLDLRE ELSLAFEKLF EKAHDFTDSP 360
361 YISHNHRKNI LSYCDNCKLE FDLYLNTIMK DQHEGGGGAG GVGGVGGGQV KGRSDPELGM 420
421 LSSLEELCKQ LVVSVSSQIE DFNESLKICS KLVKSFHVLA TNYDIDNLNQ RSSKFHDCCD 480
481 HIFDICKLLQ HIAPTERLQV QAKCLAINLR IYGPQVFIAA KILWKYSNSS AANENFESFS 540
541 DMWKWLTNEI SMIAKKILVS INTTKGDRDA DAEKCESSSD KLTKSGV
|
| Detection Method: |  |
| Confidence: | 34.0 |
| Match: | 1st6A |
| Description: | Crystal structure of a cytoskeletal protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47862012796505 | bayes_pls_golite062009 |
| protein binding | 2.02579891050608 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.07751635463993 | bayes_pls_golite062009 |
| cadherin binding | 0.801778192092067 | bayes_pls_golite062009 |
|
Region A: Residues: [588-787] |
1 11 21 31 41 51
| | | | | |
1 PATEDGEMVE YSGLEGKNNG DLNTYQSKWS EDLSDDNDIL KRAKNMSAMA FLMYQFTKGN 60
61 GSLRTTQDLF TQAEYFAEEA NRLYKVLRHF SYQVPASDNK KDLLNILDRV PTFVQALQFT 120
121 VKDHTVGKAA TFVKVDHVIR ETKNLMNVIN KVVSKCFECA TKYKLNLTGI TGGLTSERSN 180
181 ENMAGGMCDS KGTTSSSDIP
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 1rkeB |
| Description: | Human vinculin head (1-258) in complex with human vinculin tail (879-1066) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.47862012796505 | bayes_pls_golite062009 |
| protein binding | 2.02579891050608 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.07751635463993 | bayes_pls_golite062009 |
| cadherin binding | 0.801778192092067 | bayes_pls_golite062009 |
