| Protein: | CG5594-PC |
| Organism: | Drosophila melanogaster |
| Length: | 1059 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5594-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
815.0 | [0..3] | [1059..143] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MQSNSAKDDS DEMEIIPSEH NGTVHETKNE DSGDIHRAEE NQKSSIDPNL YLYDDDLETR 60
61 PHISTFISSI ANYENTIPAA TDPDAKPAAP SARM
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-568] |
1 11 21 31 41 51
| | | | | |
1 GTLIGVFLPC IQNIFGVILF IRLTWVVGTA GAVCGFLIVL TCCCVTMLTA ISMSAIATNG 60
61 VVPAGGSYFM ISRSLGPEFG GAVGMLFYTG TTLAAAMYIV GAVEIVLTYM APWASIFGDF 120
121 TKDADAMYNN FRVYGTLLLI FMGLIVFLGV KFVNKFATVA LACVILSIIA VYVGIFDNIH 180
181 GNEKLYMCVL GKRLLKDIPL ENCTKEDSFL RDIYCPDGKC EEYYLANNVT KVKGIKGLAS 240
241 GVFYDNIFPS FLEKGQFISY GKSAIDIENT SGESYNQIMA DITTSFTLLI GIFFPSVTGI 300
301 MAGSNRSGDL ADAQKSIPIG TICAILTTST VYLSSVMFFA GTVDNLLLRD KFGQSIGGKL 360
361 VVANIAWPNQ WVILIGSFLS TLGAGLQSLT GAPRLLQAIA RDEIIPFLAP FAKSSKRGEP 420
421 TRALLLTIVI CQCGILLGNV DLLAPLLSMF FLMCYGFVNL ACAVQTLLRT PNWR
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [569-650] |
1 11 21 31 41 51
| | | | | |
1 PRFKFYHWSL SLIGLTLCIS VMIMTSWYFA LIAMGMAIII YKYIEYRGAE KEWGDGIRGM 60
61 ALTAARYSLL RLEEGPPHTK NW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [651-872] |
1 11 21 31 41 51
| | | | | |
1 RPQILVLSKL NDNLLPKYRK IFSFATQLKA GKGLTICVSV IKGDHTKITN KAVDAKATLR 60
61 KYMTDEKVKG FCDVLVAQQI GEGLSSVIQT IGLGGMKPNT VIIGWPYSWR QEGRNSWKTF 120
121 IQTVRTVAAC HMALMVPKGI NFYPESNHKI GGNIDIWWIV HDGGLLMLLP FLLKQHRTWR 180
181 NCKLRIFTVA QIEDNSIQMK KDLKTFLYHL RIEADVEVVE MN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [873-1059] |
1 11 21 31 41 51
| | | | | |
1 NSDISAYTYE RTLMMEQRNQ MLRALGLNKK ENSKVVQTIV DHHYDATKTA SKVRFADPTI 60
61 EETQHHDSQN DEKRNSIDLD GPENADTPET TSNKDESTEK ADGDFKSSVK PDEFNVRRMH 120
121 TAIKLNEVIV EKSQDAQLVI MNLPGPPREV RAERERNYME FLEVLTEGLE KVLMVRGGGR 180
181 EVITIYS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
