| Protein: | vir-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1854 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vir-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1941.0 | [0..1] | [1854..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MADVDDGSEL LFFDTFSHEE VTDINLDLVQ FPKPVFITQV RIIPLGARVQ ADFPGGVRLG 60
61 ATNPSKFDLE FFVNDLGMPA ASAFENLGLL RYNQNDCIHL DCSQEKIVTD GLVLRGWYST 120
121 ITLAIYGIFT NSVTEPIASP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-336] |
1 11 21 31 41 51
| | | | | |
1 TLPCEPVGPE IANLSGEVLL QEDVLKDEWQ EPMQAELLTA HKGNVSDYDP EDMEYGMSRD 60
61 HYHQHAEEQE QREMRRLRRS THSTDHSPPP PRRSHTHSES NDREYIRCSR DKGSRDWSRS 120
121 PEYSSHRSRR KRSERSRSVV DEHKWPRTPP ASIDSPTRPR SPDTMDYEDE DSRSHYKMQS 180
181 SHYRHSSESL HRGERD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [337-405] |
1 11 21 31 41 51
| | | | | |
1 RDDEDRSCTP QEQFEPILSD DEIIGDDEED DAVDAAAIAE YERELEAAAA AAPPAIDAFE 60
61 PWQKPLLVF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-570] |
1 11 21 31 41 51
| | | | | |
1 EGDMAAHFCK ELETLKLLFK KLVLQTRCEN VNAFSEEHGA SVDEREQFVY LGEQLNNQLG 60
61 YLAQHYKRRN FVLQQFFGND ELHLRQAANV LQIALSFQAA CMQPQPAFKI RHIKLGARMA 120
121 ELLGSSEELF QHLLKEHKFD IFEAVFRLYH EPYMALSIKL QLLKA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [571-811] |
1 11 21 31 41 51
| | | | | |
1 VYALLDTRMG IEHFMGAKNN GYQMIVEAIK TAKLTRTKYA LQAIIKKLHL WEGLESVQIW 60
61 CRRLFVDRII IPGNRDQMED TVITCQQIEF AFEMLMDALF SSQLSYLQPR RFLPVSKKFE 120
121 VVTDPTAQRS FGNALQSYLG QNSLAESLLV MLANCKELPA TTYLSMLDLM HTLLRSHVGI 180
181 DYFVDDAFPV TQTIVAILLG LDEVPRNPEE KEEKAEKSDA EDKAMEVENE AVEAGGEKPT 240
241 P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [812-1048] |
1 11 21 31 41 51
| | | | | |
1 PTADEEGKPV AAPISVPAPA AAPQVRPRPI LRPVLPRLAR LGIEMSYKVQ TRYHLDAIAY 60
61 AAAAPEYDAV KLATHMHAIY SQTCDPAGRQ HTVEVLGLNN NLKIFMDLIK KEQRLQTQRQ 120
121 LSSPGTKYKS PVLSYAVDMV DACVRYCEQL DYLIEHGGVI LELAKNHETF EPSVSAVLQE 180
181 MYVYMKPLEA INVFVYDDIM PLVEVIGRSL DYLTTFPGDL IMAMRILRYL SISKPLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1049-1228] |
1 11 21 31 41 51
| | | | | |
1 GQKAPPVTEE LKHRFVALQL YAADGVQLCI QIMERLCAYF EQPGAHAPAL MTIQGVHCCQ 60
61 IMLPTLQILR ELLSYAILCR DGTYKDLTAI DHLVKVYYLL YYFPTRCQAG PEVEQCKMEV 120
121 VQTLLAYTQP NEQDEESLHK SLWTLMIREV LKNVDGPAHF IPGLKLLAEL LPLPLPMPQP 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1229-1307] |
1 11 21 31 41 51
| | | | | |
1 LCDQLQQQHK QRLITERKLW SAHLHPQSGQ IAKLVEALAP SSFPQLSELL QRVCMQLSDL 60
61 APNMTLLIAK TITELLCNE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1308-1500] |
1 11 21 31 41 51
| | | | | |
1 YQTSNCIPTT NLERLLRFST RLCAFAPLKS SMLSILSGKF WELFQSLLAL NEFNDVVSNC 60
61 QEAVHRILDS FLDSGISLIS HKSTASPALN LAAALPPKEL IPRIIDAVFS NLTSVEVTHG 120
121 ISILAVRNLV ILTEHDFTFY HLAQLLKQKI TEFQAWMERV ILHNETVEYN ANIESLILLL 180
181 RSLTQIEPPP AMS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1501-1629] |
1 11 21 31 41 51
| | | | | |
1 AMPHRTLKLG ATELAQLVEF QDIELAKPPV LSRILTVMEK HKAVANEAAL SDLKQLILLQ 60
61 ASKQEILAGT STETPPEAEG EANPSASSCS ASLTVEPYLP QAEGIVTQYE ARPIFTRFCA 120
121 TAENAQLTA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1630-1854] |
1 11 21 31 41 51
| | | | | |
1 RYWLDPLPIE LIEDMNEPIY ERIACDLTDL ANVCLNPDLN VAGDSKRVMN LSGSPQSNRE 60
61 MTPTAPCFRT RRVEVEPATG RPEKKMFVSS VRGRGFARPP PSRGDLFRSR PPNTSRPPSL 120
121 HVDDFLALET CGAQPTGPTG YNKIPSMLRG SRVGRNRGSR ISAAAAFRQK KMMRIGSPSS 180
181 WAESPGSYRS ASDSHFSSSD SHYSSPHYSG RPRGRGLRSR PSYLR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
