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View Structure Prediction Details

Protein: CG9849-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9849-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|125811604, gi... - gi|54637117|gb|EAL26520.1| GA22071 [Drosophila pseudoobscura pseudoobscura], gi|125811604|ref|XP_001...
gi|125811604|ref... - GA22071-PA [Drosophila pseudoobscura], GA22071 [Drosophila pseudoobscura pseudoobscura]
178.0 [0..1] [196..1]
gi|8886326 - gi|8886326|gb|AAF80450.1|AF161719_1 vacuolar targeting receptor bp-80 [Triticum aestivum]
170.0 [0..14] [196..7]
gi|108862099, gi... - gi|215694863|dbj|BAG90054.1| unnamed protein product [Oryza sativa Japonica Group], gi|115487010|ref...
166.0 [0..24] [196..124]
VSR1_PEA - Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1
165.0 [0..5] [196..3]
gi|116128007, gi... - gi|118785276|ref|XP_314522.3| ENSANGP00000016982 [Anopheles gambiae str. PEST], gi|116128007|gb|EAA0...
163.0 [0..22] [196..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIAWLVLAA TLSRSIRAST TISIPITTQD IIAGDVFFEI LSPSELEYTY RLRPAKDFGS  60
   61 AFSERLEGVP LVITDPPGAC QEIRNARDLN GGVALIDRGE CSFLTKTLRA EAAGALAAII 120
  121 TEYNPSSPEF EHYIEMIHDN SQQDANIPAG FLLGKNGVII RSTLQRLKRV HALINIPVNL 180
  181 TFTPPSKINH PPWLGW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1v6cA
Description: Crystal Structure of Psychrophilic Subtilisin-like Protease Apa1 from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle