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View Structure Prediction Details

Protein: CycB-PA
Organism: Drosophila melanogaster
Length: 530 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CycB-PA.

Description E-value Query
Range
Subject
Range
gi|116175, gi|10... - gi|157159|gb|AAA28436.1| cyclin B, sp|P20439|CG2B_DROME G2/mitotic-specific cyclin B, pir||A35144 c...
405.0 [0..1] [530..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGTTLKMRG DENASENFKQ VQLKKLTVPS MEATTKRAAL GDLQNRGISR PIAAKDAAQK  60
   61 DSKDLKLTDA LRNAKARVDS HWKKQPLGST NGNGNGAVPP KVNEGGVSAF LRSNSVRNRV 120
  121 PTKTTVEPTK VTVKSSSSEN VN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPTLKREDSN LSKKSLTKLR AALAKPVMGV SGIRREPVAV SRKEAETKKE LPETKKDSLE  60
   61 VKKDATRMPL IRGNSAVTTT TST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-530]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTTMSLSSK RLAGIEDIDA NDKENLVLVS EYVNDIYDYL YQVELEQPIH KDHLAGQKEV  60
   61 SHKMRAVLID WINEVHLQFH LAAETFQLAV AIIDRYLQVV KDTKRTYLQL VGVTALFIAT 120
  121 KYEELFPPAI GDFVFITDDT YTARQIRQME LQIFKAIDCN LSRPLPIHFL RRYSKAAGAE 180
  181 DEHHTMSKYF IELASVDYEM ATYRPSEIAA ASLFLSLHLL NGNHRAGTGF NDRHWTPTLT 240
  241 FYSRYSAAHL RPITRLIAKL ARDAPQAKLK AIYNKYQGSK FQKIALRTEL TGALMDSIVG 300
  301 QSQRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.154902
Match: 2b9rA
Description: No description for 2b9rA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle