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View Structure Prediction Details

Protein: Obp59a-PB
Organism: Drosophila melanogaster
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp59a-PB.

Description E-value Query
Range
Subject
Range
gi|85861107 - gi|85861107|gb|ABC86503.1| IP01865p [Drosophila melanogaster]
332.0 [0..4] [202..1]
gi|27414065 - gi|27414065|gb|AAO12099.1| odorant-binding protein AgamOBP29 [Anopheles gambiae]
gi|118792228, gi... - ref|XP_320218.1| ENSANGP00000023696 [Anopheles gambiae], gi|118792228|ref|XP_320218.3| odorant bindi...
258.0 [0..5] [201..23]
gi|55247432, gi|... - gi|57966238|ref|XP_561559.1| ENSANGP00000026253 [Anopheles gambiae str. PEST], gi|55247432|gb|EAL424...
247.0 [0..5] [201..23]
gi|54635666, gi|... - gi|54635666|gb|EAL25069.1| GA12338-PA [Drosophila pseudoobscura], gi|125807708|ref|XP_001360494.1| G...
216.0 [0..2] [202..1]
gi|108872270, gi... - gi|157129255|ref|XP_001655335.1| hypothetical protein AaeL_AAEL011416 [Aedes aegypti], gi|108872270|...
151.0 [0..42] [199..150]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLIFLLIC LSCGTCSIYA LKCRSQEGLS EAELKRTVRN CMHRQDEDED RGRGGQGRQG  60
   61 NGYEYGYGMD HDQEEQDRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGNRGGYGNR RQRGLRQSDG RNHTSNDGGQ CVAQCFFEEM NMVDGNGMPD RRKVSYLLTK  60
   61 DLRDRELRNF FTDTVQQCFR YLESNGRGRH HKCSAARELV KCMSEYAKAQ CEDWEEHGNM 120
  121 LFN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.05
Match: 1tujA
Description: Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-d4 propionate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle