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View Structure Prediction Details

Protein: Obp59a-PB
Organism: Drosophila melanogaster
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Obp59a-PB.

Description E-value Query
Range
Subject
Range
gi|85861107 - gi|85861107|gb|ABC86503.1| IP01865p [Drosophila melanogaster]
332.0 [0..4] [202..1]
gi|27414065 - gi|27414065|gb|AAO12099.1| odorant-binding protein AgamOBP29 [Anopheles gambiae]
gi|118792228, gi... - ref|XP_320218.1| ENSANGP00000023696 [Anopheles gambiae], gi|118792228|ref|XP_320218.3| odorant bindi...
258.0 [0..5] [201..23]
gi|55247432, gi|... - gi|57966238|ref|XP_561559.1| ENSANGP00000026253 [Anopheles gambiae str. PEST], gi|55247432|gb|EAL424...
247.0 [0..5] [201..23]
gi|54635666, gi|... - gi|54635666|gb|EAL25069.1| GA12338-PA [Drosophila pseudoobscura], gi|125807708|ref|XP_001360494.1| G...
216.0 [0..2] [202..1]
gi|108872270, gi... - gi|157129255|ref|XP_001655335.1| hypothetical protein AaeL_AAEL011416 [Aedes aegypti], gi|108872270|...
151.0 [0..42] [199..150]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLIFLLIC LSCGTCSIYA LKCRSQEGLS EAELKRTVRN CMHRQDEDED RGRGGQGRQG  60
   61 NGYEYGYGMD HDQEEQDRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGNRGGYGNR RQRGLRQSDG RNHTSNDGGQ CVAQCFFEEM NMVDGNGMPD RRKVSYLLTK  60
   61 DLRDRELRNF FTDTVQQCFR YLESNGRGRH HKCSAARELV KCMSEYAKAQ CEDWEEHGNM 120
  121 LFN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.05
Match: 1tujA
Description: Solution structure of the honey bee general odorant binding protein ASP2 in complex with trimethylsilyl-d4 propionate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle