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View Structure Prediction Details

Protein: dnr1-PA
Organism: Drosophila melanogaster
Length: 676 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnr1-PA.

Description E-value Query
Range
Subject
Range
EPB41L5 - erythrocyte membrane protein band 4.1 like 5
322.0 [0..1] [424..43]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWCIVNLPNG TQQAVKWDPK ANGQECLEKV CRAMNIICEM EYFGLEHWTP NQKESQTRQW  60
   61 INLRNRLSGD SGSSGSGIQL MLALRVKFWV PVHFILQESV RNLFYMQARR DLLEGRLTAP 120
  121 DWSGAAKLAA LLCQADGLRF NESSLKADCP MRMRRELAQQ QQQQQQQAQQ HRLEQQRKEK 180
  181 EHVLSFKKRR LSKQKSMEHI EVCTLPAAST TSCSLQPSPS ASASASASAS ASASASTSAC 240
  241 SQTHSNSSSS SPSNSSSQTG LDERLASNPL RVYEEYFMQP SCEGEPPADY LRQIAVEHGK 300
  301 LAKLQMSLKT AKYWLLKSIQ DLEGYGEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 1j19A
Description: Radixin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0934358341245259 bayes_pls_golite062009
protein binding 0.03789551947602 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [329-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFSGVTTNES ATRCDIAVGA HGITVCRGGE KQSIPFGAIA AAKSLRRTFK LEYVDDHNDR  60
   61 KELEIKLPKQ PIAAGLYRSI TERHAFYV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.95
Match: 2he7A
Description: No description for 2he7A was found.

Predicted Domain #3
Region A:
Residues: [417-676]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDKVRGVVTN QFTRDLKGTI ASMFMENTEL GKRYVFDIQH TCREVHDQAR RTLHERGGDL  60
   61 VAEGAEGCSA VAGGLGASAV GEPGVSPWAM ALTTGAGGSM AGKIDLAIRE KEAREAAIER 120
  121 CVDTRISEAM QCKICMDRAI NTVFNPCCHV IACAQCAARC SNCPNCRVKI TSVVKIYLPP 180
  181 ELRTSQTGSG ATTTSSSSIM GDGQVEEQLL QQQLDEISAA PASLEAGADA GVGVGGMAVG 240
  241 AGAGAGATGP GGQPKVTTAA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 1fbvA
Description: Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.434026084000615 bayes_pls_golite062009
protein binding 0.31534665043077 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle