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View Structure Prediction Details

Protein: wrapper-PA
Organism: Drosophila melanogaster
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrapper-PA.

Description E-value Query
Range
Subject
Range
Dscam-PAJ - The gene Down syndrome cell adhesion molecule is referred to in FlyBase by the symbol Dmel\Dscam (CG...
310.0 [0..2] [499..588]

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Predicted Domain #1
Region A:
Residues: [1-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPHMCSVVR CLLAALILGQ VQAELDFNND LENSQKFKSI PTTVKTYEND TVQLPCTLNT  60
   61 PFRYVRWHRD DVALVDSRHP ELPPPDRIML WPNGSLQVAN VQSSDTGDYY CEMNSDSGHV 120
  121 VQQHAIEVQL APQVLIEPSD LTEQRIGAIF EVVCEAQGVP QPVITWRLNG NVIQPQSNTG 180
  181 NRQSLILEIK SRNQAGLIEC VASNGVGEPA VANVYLHVLF SPEVSIPQPV VYTKLGSRAH 240
  241 LECIVEAAPA ATVKWFHHGL PVALGAHSTT HESELQTNRS VDHYVNAVRH MLVVKSVRNA 300
  301 DMGQYECRAS NQISVKSGSV ELTGRPMPCL FKINPGTQSS TSHVLVWQTE SLLPIMEFKL 360
  361 KFRQIPSNNV TRQVRTNWTE LTIPAQATNG LIYITTYTLH GLQPASLYEV SVLARNSFGW 420
  421 SDNSKIVRFA TGGEVELPNY STESELQDDF TEEDFHNEIT QRSEVLSASM MFNSGSVNGR 480
  481 GGISAFIYSL CLINILRLIS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 1e07A
Description: Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle