| Protein: | gi|21645464, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21645464, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
330.0 | [0..103] | [377..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MGSKGESKCH RKGKTKRPVK REENPPHRRF KCQLAQRQKS RTSQSLSNKS SCRAEQNVRN 60
61 TTTRVKLCKS LDPKTNRKFF TAFFSLLCLV RILDYRYWSY SKMERFGIPR GK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-254] |
1 11 21 31 41 51
| | | | | |
1 RPRVQVSLDD KERAIARIRG GETKAGISRE LGVPESTVRG WVKRAEQRLA RETTSQTGSA 60
61 NYSTILAMTL AKPQVTISTK SSASSVISKS SYSSPPLDLK PLKQPQKRNI NGHPVTCTQD 120
121 PVEDSAATSI PIPVPIPVPL PV
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1hlvA |
| Description: | DNA-binding domain of centromere binding protein B (CENP-B) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [255-377] |
1 11 21 31 41 51
| | | | | |
1 PPMVSPDSEQ QMSAWLHIFN AGILNFTLIA SAAVLQARSR GLADRLPLWQ IITDFVDEAE 60
61 RNVNANGGWY LEGQPATGHM SARQRPVRVP TKVHSYRRNL KAPPAHITAE DDEDSYTDAD 120
121 VPH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
