| Protein: | CG9346-PA |
| Organism: | Drosophila melanogaster |
| Length: | 957 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9346-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
553.0 | [0..1] | [957..2] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MSKQGNKSKD SAAASATLKR ISEKKLEAFT VGTFSKRQLS KKELEDQKKK EDAAAAAHAF 60
61 KEFVETFQDA PTPSSKVWVK AGTYDAGSRR EDKSEKGKLY KPVSKLMEKS SSDKVEDYAK 120
121 TLASDLKKDS GPLKKKNQEK KKSNLELFKE ELRQIQEERE ERHKYKHMAS SHSAPAQQPA 180
181 ASAAPVPSSS VSTTSQNSSS SKESGSFDTG DPNTTNLYLG NLNPKISEQQ LMEIFGRYGP 240
241 LASIKIMWPR SEEEKQRGRN CGFVAYMSRK DAERALKTLN GRYIMGYEMR LGWGKTVPI
|
| Detection Method: |  |
| Confidence: | 19.0 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [300-476] |
1 11 21 31 41 51
| | | | | |
1 MNTPIFTPQA LLEMTLPPPP SGLPFNAQPP PSEADVLPKK NYKEFNQEDK ENMERILAKC 60
61 VVKVHIPTEK AVLNVIHRMI EFVIREGPMF EALIMIREME NPLFAFLFDN ESPAHIYYRW 120
121 KLFSLLQGDT PNEWREEEFR MFKNGPVWKP PIANFYTQGM PDELVVDPDA PVVHKGA
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [477-625] |
1 11 21 31 41 51
| | | | | |
1 LSNAQRNRLE DLIRHLTPER ARIGDAMIFC IEHADAADEI CECIAESLSN INTLASKKIA 60
61 RLYLISDILH NCTVKVANAS FFRKSVEKQL LDIFDNLHNY YLNIESRLKA EGFKSRVCNV 120
121 IRTWEEWTIY PKDFMAQLTA KFLGKPYVK
|
| Detection Method: | |
| Confidence: | 13.09691 |
| Match: | 2diwA |
| Description: | No description for 2diwA was found. |
|
Region A: Residues: [626-753] |
1 11 21 31 41 51
| | | | | |
1 PVNNSPQAEE TRFDEALDED IDGAPLSGEE KDDEDLDGVP LDGAALLKSA LKRAIPDADA 60
61 GTPKRDTPKK DEYLDEIDGI PLDDDLDGVP LEKETKSTAK LPGFIPSKWE TVDPQQVEAQ 120
121 AITTSKWD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [754-957] |
1 11 21 31 41 51
| | | | | |
1 TLDPPDPPKF FSSDDDSGED NPQKYTDEMR QKLRDIESKA IQYQDELESG KRRLEPGWSV 60
61 PEQVEQFRKR LLKQDSRSEA TVDSPLSYMH IKSKSSKVSE SPALFRSSSR KRSHSPFSGG 120
121 ESKRRDYSPE TSRSSKSSKR NRSRSPSSSP KRYTERSSRS SRYETPASGS SRSRSSPTSS 180
181 RSSRREEPSP PRHRSDKHKH KHRH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
