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View Structure Prediction Details

Protein: CG9235-PA
Organism: Drosophila melanogaster
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9235-PA.

Description E-value Query
Range
Subject
Range
gi|62089328 - gi|62089328|dbj|BAD93108.1| protein tyrosine phosphatase, receptor type, G precursor variant [Homo s...
311.0 [0..9] [332..75]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGCLTCGLL NYLWCSLEDI SCRLQDSNLL KFILAIGVAL LVLFNVYTGF SLANRCDEGS  60
   61 NDGCANAGGD NCRRLRGSPE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYNYDWDQGP HTWDTACNNQ SPINIDMNCV EINYFDTPLI WSHYNSIPLG IRLENNGHTL  60
   61 ILRAAFPERT PSIDGGDLLG RFDFREISFR WSWASSLGSE HTLDHHHSPL EMQCLHTDGD 120
  121 GCDGCSSSQG VLMISYMFDL SEHNPFLDVL IQHLAAVEQA GQVVEVPPFP LSYLMSPFYD 180
  181 KFYSYNGSLT EPPCHRGAEW LIYPESLAIS ERQLNEFRQL RDRRGSRIAR NARPVQPIGD 240
  241 RMVYLNRYRT GF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 1g3zA
Description: Carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.59667704693142 bayes_pls_golite062009
protein binding 1.30419076438266 bayes_pls_golite062009
catalytic activity 0.97285738666961 bayes_pls_golite062009
transition metal ion binding 0.36067052386032 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle