| Protein: | exu-PC, exu-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exu-PC, exu-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
671.0 | [0..1] | [532..1] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MVADNIDAGV AIAVADQSSS PVGDKVELPA GNYILVGVDI DTTGRRLMDE IVQLAAYTPT 60
61 DHFEQYIMPY MNLNPAARQR HQVRVISIGF YRMLKSMQTY KIIKSKSEIA ALKDFLNWLE 120
121 QLKTKAGPSS DGIVLIYHEE RKFIPYMILE SLKKYGLLER FTASVKSFAN SINLAKASIG 180
181 DANIKNYSLR KLSKILSTTK EEDAACSAST SGSGSGLGSG SSMVSDSVSI SPR
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 1j53A |
| Description: | N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 1.44290958761413 | bayes_pls_golite062009 |
| nuclease activity | 1.00688665458061 | bayes_pls_golite062009 |
| binding | 0.715089866064182 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.642554618883525 | bayes_pls_golite062009 |
| ribonuclease activity | 0.479837770977411 | bayes_pls_golite062009 |
| RNA binding | 0.217121396162622 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.0891359324170981 | bayes_pls_golite062009 |
| protein binding | 0.035326007863533 | bayes_pls_golite062009 |
|
Region A: Residues: [234-414] |
1 11 21 31 41 51
| | | | | |
1 DSTVTNGDDK QSSKNAVQGK RELFDGNASV RAKLAFDVAL QLSNSDGKPE PKSSEALENM 60
61 FNAIRPFAKL VVSDVLELDI QIENLERQNS FRPVFLNYFK TTLYHRVRAV KFRIVLAENG 120
121 FDLNTLSAIW AEKNIEGLDI ALQSIGRLKS KDKAELLELL DSYFDPKKTT VKPVVKGNSN 180
181 N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [415-532] |
1 11 21 31 41 51
| | | | | |
1 NNNYRRRNRR GGRQSVKDAR PSSSPSASTE FGAGGDKSRS VSSLPDSTTK TPSPNKPRMH 60
61 RKRNSRQSLG ATPNGLKVAA EISSSGVSEL NNSAPPAVTI SPVVAQPSPT PVAITASN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
