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View Structure Prediction Details

Protein: CG11159-PA
Organism: Drosophila melanogaster
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11159-PA.

Description E-value Query
Range		 Subject
Range
LYSC_ERYPA - Lysozyme C OS=Erythrocebus patas GN=LYZ PE=3 SV=1
LYSC_CHLAE - Lysozyme C OS=Chlorocebus aethiops GN=LYZ PE=2 SV=1
 203.0 [0..13] [145..4]
LYSC_MACMU - Lysozyme C OS=Macaca mulatta GN=LYZ PE=2 SV=1
 201.0 [0..13] [145..4]
LYSC_PAPAN - Lysozyme C OS=Papio anubis GN=LYZ PE=1 SV=1
LYSC_CERAT - Lysozyme C OS=Cercocebus atys GN=LYZ PE=2 SV=1
 201.0 [0..13] [145..4]
LYSC_ALLNI - Lysozyme C OS=Allenopithecus nigroviridis GN=LYZ PE=3 SV=1
 200.0 [0..13] [145..4]
gi|123982912, gi... - gi|123997593|gb|ABM86398.1| lysozyme (renal amyloidosis) [synthetic construct], gi|123982912|gb|ABM8...
LYZ - lysozyme
LYSC_PANPA - Lysozyme C OS=Pan paniscus GN=LYZ PE=3 SV=1
LYSC_PANTR - Lysozyme C OS=Pan troglodytes GN=LYZ PE=2 SV=1
 199.0 [0..13] [145..4]
LYSC_COLAN - Lysozyme C OS=Colobus angolensis GN=LYZ PE=3 SV=1
LYSC_COLGU - Lysozyme C OS=Colobus guereza GN=LYZ PE=2 SV=1
 199.0 [0..13] [145..4]
LYSC_HYLLA - Lysozyme C OS=Hylobates lar GN=LYZ PE=2 SV=1
 198.0 [0..13] [145..4]
LYSC_PONPY - Lysozyme C OS=Pongo pygmaeus GN=LYZ PE=2 SV=1
 198.0 [0..13] [145..4]
LYSC_NASLA - Lysozyme C OS=Nasalis larvatus GN=LYZ PE=3 SV=1
 198.0 [0..13] [145..4]

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Predicted Domain #1
Region A:
Residues: [1-146] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHLPKGGA LFLVLNLLLL SQWETESKLL TRCQLAKELL RHDFPRSYLS NWVCLVEAES  60
   61 GRSTSKSMQL PNQSVSYGLF QINSKNWCRK GRRGGICNIK CEEFLNDEIS DDSRCAMQIF 120
  121 NRHGFQAWPG WMSKCRGRTL PDVSRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 1gd6A
Description: Lysozyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lysozyme activity 4.5561178625885 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.12684901385635 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.12571011956161 bayes_pls_golite062009
binding 0.922529162842036 bayes_pls_golite062009
drug binding 0.697842971559487 bayes_pls_golite062009
protein binding 0.308782007209778 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle