| Protein: | Ote-PA |
| Organism: | Drosophila melanogaster |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ote-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..12] | [405..702] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MADVDDFDSL SNAELRAKML AQGLPNIPVT DSSRKVLVKR LRASIGGQAS PAASPKKTNR 60
61 RETLAP
|
| Detection Method: |  |
| Confidence: | 2.01 |
| Match: | 1jeiA |
| Description: | Inner nuclear membrane protein emerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lamin binding | 3.77197010620371 | bayes_pls_golite062009 |
| binding | 2.42312572249097 | bayes_pls_golite062009 |
| protein binding | 1.36005487353381 | bayes_pls_golite062009 |
|
Region A: Residues: [67-253] |
1 11 21 31 41 51
| | | | | |
1 APGAPSAPAA ASTPVDKLDG NKVAPATKAR RTITAAEAKE PVRRLPEEAI RRRPDEADRL 60
61 RSEEPVAARK PTTAPAAQPV QTRRTSTSSG SERKVVEPLR KPETIVEQPA SSKRADREEN 120
121 YLKVNSLIVL ESDEEEDEQL VQAADLVEQE HAARQKTTKL ASSGTTTYEY KSKVVEPPRR 180
181 QVYEATA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [254-424] |
1 11 21 31 41 51
| | | | | |
1 APVLPPSVPS ARAQTTSSTR SYDYASNPAP GRYSSFVRTA AQGYVTAEAP PVASYSSSYK 60
61 RTYANELSDD TDSKEDQYES TFARNLARLR AERIGDRISP YSRRTLASGN AGSGSLGYEP 120
121 RARRSLRPND NSVSEAFNRW LNSLEQKYHI KSKLFIVLLV LLLIGVYYIF Y
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
