YRC Public Data Repository - Protein Structure Prediction

Protein:	Mapmodulin-PA, M...
Organism:	Drosophila melanogaster
Length:	261 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mapmodulin-PA, M....

Description	E-value	Query Range	Subject Range
gi\|55770563 - ref\|XP_550272.1\| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group... gi\|115434762, gi... - gi\|55770563\|ref\|XP_550272.1\| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...	145.0	[0..7]	[234..266]
gi\|186468985, gi... - gi\|23124578\|ref\|ZP_00106558.1\| COG4886: Leucine-rich repeat (LRR) protein [Nostoc punctiforme PCC 73...	144.0	[0..4]	[233..32]
gi\|47498983 - gi\|47498983\|gb\|AAT28307.1\| leucine-rich repeat receptor-like protein kinase [Pyrus pyrifolia]	144.0	[0..2]	[245..101]
gi\|90591507, gi\|... - gi\|90591507\|ref\|ZP_01247149.1\| PKD:Leucine-rich repeat [Flavobacterium johnsoniae UW101], gi\|9043256...	143.0	[0..5]	[239..258]
FBpp0300846 - type=protein; loc=3R:join(22363345..22363506,22370765..22370882,22380079..22380661,22380955..2238137...	143.0	[0..2]	[254..70]

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Predicted Domain #1

Region A:
Residues: [1-195]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKRIELERR ARKVNQITEL NLDNCRSTSI VGLTDEYTAL ESLSLINVGL TTLKGFPKLP  60
   61 NLKKLELSDN RISSGLNYLT TSPKLQYLNL SGNKIKDLET LKPLEEFKNL VVLDLFNNDA 120
  121 TQVDNYREKI FKMLPSLNFL DGFDCNDEEV QSDGDDDDEV NGNDSDEVGV SDEDDDSDDS 180
  181 DEEANGEVSL SEVYN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	7.0
Match:	2je0A
Description:	No description for 2je0A was found.

Predicted Domain #2

Region A:
Residues: [196-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLEEDNSDW EGEDEAGEED EEEDSDIDDA DGDANESAAS VNAKDKDGEK EADESQVRGK  60
   61 KRKHDG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits