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View Structure Prediction Details

Protein: FBpp0309243
Organism: Drosophila melanogaster
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309243.

Description E-value Query
Range
Subject
Range
CG5036-PB - This gene is referred to in FlyBase by the symbol Dmel\CG5036 (CG5036, FBgn0028743). It is a protein...
255.0 [0..1] [271..1]
gi|13562149, gi|... - gi|39645828|gb|AAH63490.1| Regulator of G-protein signaling 20 [Homo sapiens], gi|13654235|ref|NP_00...
gi|114620131 - gi|114620131|ref|XP_001151182.1| PREDICTED: regulator of G-protein signalling 20 isoform 5 [Pan trog...
225.0 [0..36] [262..4]
RGS20_MOUSE - Regulator of G-protein signaling 20 OS=Mus musculus GN=Rgs20 PE=1 SV=1
222.0 [0..38] [262..5]
gi|114620123 - gi|114620123|ref|XP_001151118.1| PREDICTED: regulator of G-protein signalling 20 isoform 4 [Pan trog...
217.0 [0..46] [262..160]
RGS20_BOVIN - Regulator of G-protein signaling 20 OS=Bos taurus GN=RGS20 PE=1 SV=2
213.0 [0..37] [262..136]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCTVSELPS GCRLRGMTAS SQQSAANNSG NNGNGNGNGG GGGVVGGGGS LGGVSPTVGG  60
   61 SVGILGSTSN VLQESNATTF QRPQSQKPCC FCWCCCCSCS CLAIKNADEN AP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKRDLVNAEF LDGEQPTLEE IRSWGKSFDK LMKSTAGRKV FQNFLRSEFS EENILFWLAC  60
   61 EDLKKENSPE LVEEKARLIY EDYISILSPR EVSLDSRVRE IVNRNMIEPT THTFDEAQIQ 120
  121 IYTLMHRDSY PRFLNSQKFK TLAQLQDNSN AGSKADSPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 1zv4X
Description: Structure of the Regulator of G-Protein Signaling 17 (RGSZ2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle