| Protein: | rhi-PA |
| Organism: | Drosophila melanogaster |
| Length: | 418 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rhi-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..1] | [418..1] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSRNHQRPNL GLVDAPPNDH VEEYVVEKIL GKRFVNGRPQ VLVKWSGFPN ENNTWEPLEN 60
61 VGNCMKLVSD FESEVFRLHR KAAAKSVGKS KSS
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 2dntA |
| Description: | No description for 2dntA was found. |
| Term | Confidence | Notes |
| binding | 2.63081545253584 | bayes_pls_golite062009 |
| chromatin binding | 2.26856644581646 | bayes_pls_golite062009 |
| protein binding | 1.63976398283458 | bayes_pls_golite062009 |
| transcription repressor activity | 1.08928222818715 | bayes_pls_golite062009 |
| transcription regulator activity | 0.627858578903821 | bayes_pls_golite062009 |
|
Region A: Residues: [94-269] |
1 11 21 31 41 51
| | | | | |
1 PSSSGPLITE NGPSSSKKTQ QHSKSVQAKN TAGMSKMNQK KGKNIKKTAG KIKDIENYPK 60
61 TQMPSTSQVS TDSTEVFDGN PSATTTNMIK SPRIQSLFSD LNLIEPTKDK DVGDTSLKTP 120
121 PKSRRLIEFP QREDAPLSSK HVSPMLIRKE SQPLQSSCTD DSDLGESSSS MSLPTV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [270-418] |
1 11 21 31 41 51
| | | | | |
1 SSTSSEKSIK VTKSEPKTLG QIKFSSRSSD GGHAASSLGA PKEGDIGLDL SGSDSMDSEV 60
61 ESMRRCPRRK RKKTYPDWKF PEMTKPFGVN RGLDLDKILH CYQMNDDLFM FVTWKGCSSI 120
121 DAVHINDIKE AYPLQIIKYF ESLRIIVPK
|
| Detection Method: | |
| Confidence: | 18.0 |
| Match: | 1dz1A |
| Description: | Heterochromatin protein 1, HP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.63081545253584 | bayes_pls_golite062009 |
| chromatin binding | 2.26856644581646 | bayes_pls_golite062009 |
| protein binding | 1.63976398283458 | bayes_pls_golite062009 |
| transcription repressor activity | 1.08928222818715 | bayes_pls_golite062009 |
| transcription regulator activity | 0.627858578903821 | bayes_pls_golite062009 |
