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View Structure Prediction Details

Protein: CG11419-PA
Organism: Drosophila melanogaster
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11419-PA.

Description E-value Query
Range
Subject
Range
gi|125807963, gi... - gi|54635751|gb|EAL25154.1| GA10993 [Drosophila pseudoobscura pseudoobscura], gi|125807963|ref|XP_001...
gi|194109985, gi... - gi|195150391|ref|XP_002016138.1| GL10659 [Drosophila persimilis], gi|194109985|gb|EDW32028.1| GL1065...
gi|125807963|ref... - GA10993-PA [Drosophila pseudoobscura], GA10993 [Drosophila pseudoobscura pseudoobscura]
264.0 [0..1] [195..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASMDEDIT ANPPPSSEED PLAEERLGFV REVGAQAVWS LSSCKPGFGV ERLRDNIMDT  60
   61 YWQSDGQLPH LVNIQFHKRT NISQIYIYTD YKLDESYTPS RISIRSGTNF NDLQELQVMD 120
  121 LTEPTGWVQI PIKDGNVKSI RTFMLQIAVI SNHQNGRDTH MRQIRIHAPV EGKHYPLELF 180
  181 GKFGTVDFQK FATIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.30103
Match: 1jhjA
Description: APC10/DOC1 subunit of the anaphase-promoting complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ubiquitin-protein ligase activity 6.427112868929 bayes_pls_golite062009
small conjugating protein ligase activity 6.29598849092712 bayes_pls_golite062009
acid-amino acid ligase activity 5.30907713949929 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 4.14514352069465 bayes_pls_golite062009
binding 2.31774167130542 bayes_pls_golite062009
ligase activity 2.23368019733876 bayes_pls_golite062009
protein binding 0.858220907931067 bayes_pls_golite062009
hydrolase activity 0.690426836233441 bayes_pls_golite062009
nucleic acid binding 0.533285414042183 bayes_pls_golite062009
DNA binding 0.324772578014229 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle