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View Structure Prediction Details

Protein: mbl-PB
Organism: Drosophila melanogaster
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mbl-PB.

Description E-value Query
Range
Subject
Range
gi|50730631 - gi|50730631|ref|XP_416979.1| PREDICTED: similar to muscleblind-like 2 isoform 1 [Gallus gallus]
195.0 [0..7] [225..1425]
gi|62021772 - gi|62021772|gb|AAH20418.1| MBNL2 protein [Homo sapiens]
189.0 [0..9] [225..4]
gi|55727498 - gi|55727498|emb|CAH90504.1| hypothetical protein [Pongo abelii]
gi|55727498|emb|... - hypothetical protein [Pongo pygmaeus]
188.0 [0..9] [225..4]
gi|73989199 - gi|73989199|ref|XP_859347.1| PREDICTED: similar to muscleblind-like 2 isoform 3 isoform 13 [Canis fa...
188.0 [0..9] [225..4]
gi|114650373 - gi|114650373|ref|XP_001140881.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
187.0 [0..9] [225..4]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVVNMNSL LNGKDSRWLQ LEVCREFQRN KCSRQDTECK FAHPPANVEV QNGKVTACYD  60
   61 SIKGRCNRDK PPCKYFHPPQ HLKDQLLING RNHLALKNAL MQQM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 2e5sA
Description: No description for 2e5sA was found.

Predicted Domain #2
Region A:
Residues: [105-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIAPGQPVIS GQVPAVATNP YLTGIPANSY SPYYTTGHLV PALLGPDPVT SQLGPVVPQT  60
   61 VQVAQQKIPR SDRLETSPLA AHHHQQQQQL QHQLNNINNN NNHSTAGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [213-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AATSTTATTT TNNAAAAAAA AAAAAAAAVM GHHTLEVGKK RAADTTDMFP LVFFCSFPSP  60
   61 CVFAFLNCSI FGFLRLWFSL FNLRH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle