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View Structure Prediction Details

Protein: gi|7302876, gi|2...
Organism: Drosophila melanogaster
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7302876, gi|2....

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
193.0 [0..10] [366..680]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICHQLAHLT QLGLLGVLCL AIGGSQSKAV VDQQPAASQV DSKSVAQQRI DLGLGLGDDL  60
   61 IHDHHHEHII EHHEHHHEHH DPGYWKKKVT WK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGWKKIWNPA KKQIWNPSWK KIWKPHWVKV PGWKEIQVPA WKQIWVPHWK EILVPAWKDI  60
   61 QVPDYKQIWT PELVKVGIPG EKYLGKDHEG WEYTSHDLWK KKVVWKSHWK KIWKPAKKQI 120
  121 WVPEKKLEWK EAWKQYWKPA KKEIWTDKLE WKEAWKQIWV PGWKEIWVPG WKKIWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVVISEWFPS PDHHDHHHHE HHDWDRKDTG VTATRTADGK DKVVWKRDDT NAAGKPTMLQ  60
   61 PVASADFQAK SLEAAKSPVA APAASVATTS QSFKFPGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle