| Protein: | Syn2-PC |
| Organism: | Drosophila melanogaster |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syn2-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..1] | [459..1] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MKLSDTMATP IEEKLDQNLK VRTGMVHVSD GKSRPEPLRL NLTMELLSLQ KLEVVTPSSC 60
61 HPNGPPMES
|
| Detection Method: |  |
| Confidence: | 26.09691 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [70-172] |
1 11 21 31 41 51
| | | | | |
1 KERMVQITRQ KQGGLGLSIK GGAEHKLPIL ISRIYKDQAA DITGQLFVGD AIIKVNGEYI 60
61 TACPHDDAVN ILRNAGDIVV LTVKHYRAAT PFLQKQLPLM MAY
|
| Detection Method: | |
| Confidence: | 12.30103 |
| Match: | 1u3bA |
| Description: | Auto-inhibition Mechanism of X11s/Mints Family Scaffold Proteins Revealed by the Closed Conformation of the Tandem PDZ Domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| acetylcholine transmembrane transporter activity | 5.06834908423057 | bayes_pls_golite062009 |
| binding | 2.4211406884996 | bayes_pls_golite062009 |
| protein binding | 2.25893018754605 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.20288049012953 | bayes_pls_golite062009 |
| transporter activity | 1.18978519116375 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07211582292329 | bayes_pls_golite062009 |
| PDZ domain binding | 0.87883331498113 | bayes_pls_golite062009 |
| molecular transducer activity | 0.877891218909175 | bayes_pls_golite062009 |
| signal transducer activity | 0.877891218909175 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.83498428286086 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 0.766679710300835 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.755223974149211 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.549085929250683 | bayes_pls_golite062009 |
| calcium channel regulator activity | 0.400074937231358 | bayes_pls_golite062009 |
| receptor binding | 0.359972518335054 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252733105474942 | bayes_pls_golite062009 |
|
Region A: Residues: [173-459] |
1 11 21 31 41 51
| | | | | |
1 VTRYIYGTDK LRQNAFEVRG LNGISTGVIH CDELAILSQW LKLITDNVVG LTHLQMKLYN 60
61 RNFAVGERIE YMGWVNEGVI NNNISWQSYK PRFLLLKGTE VMLFETPPLN VAGISKALVV 120
121 YKVYQTMFRI VKESETVDSR QHCFLLQSSG HEPRYLSVET RQELLRIENS WNAAIVTSVI 180
181 KLGRKTFAVS HHGKSGGLTL DWQAGFSLTE GAESATVWQY KFSQLRGSSD DGKSKLKLHF 240
241 QDHDSRAIET KELECQVLQS LLFCMHAFLT AKVASVDPAF LSSIQQT
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
