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View Structure Prediction Details

Protein: Atg9-PA
Organism: Drosophila melanogaster
Length: 845 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Atg9-PA.

Description E-value Query
Range
Subject
Range
gi|74831738 - gi|74831738|emb|CAJ30200.1| autophagy protein 9 [Drosophila erecta]
1043.0 [0..1] [845..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPHINYRS LAEEAASPFL EHHPSTGQGP SKTQDAKANA AAAHLDPLGE HGLEQPLDEH  60
   61 DTEHEGEDTP RNSGVMIHMV PETGRARWNH IEDLDSFFSR MYQYQQKHGF TVIVVDEMLQ 120
  121 VLEFGFVVWL LAFVMHCVRF DVLFGDTPPG GLNPNKTTLS DVMYPTGECL ANFTWVTYLV 180
  181 VFIAAIYLGI RLLKMVYHIT QYADIKRFYN SALHIEDSDL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNFTWHEVQQ RIRRVQAEQH MCIDKESLTE LDIYHRVLRF KNYLVALMNK QLLPVRFHIP  60
   61 LYGEVVSLSR GMLFNIDFIL FR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPGSPFQNNW QLRDEFAVRS NQTELAQRLS KLILGVALLN LVLAPVIFVW QLIYFSFSYA  60
   61 NILRKEPGAL GLRTWSNYGR LYLRHFNELD HELDARLNRA YDYADRYLNS FSSPLAAVIA 120
  121 KNLLFISGGL LLLILALGIY EEHVFQVEHL LAILAGLGAI GVVCRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [469-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIPDENLVWC PEQLMTAILA HVHYLPSEWR QQAHTTKVRQ EFSNFFQFKA GYLLSEIFSP  60
   61 FVTPFVLIFV FRPKAIELVR FFRTFTVSVR GVGNVCSFAQ MDVRKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [575-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNPDWQLTSE LEEMTRATAQ QPQQEPQQQS LAGGKTEMSL LRFTLNNPEW QMPKEAKQFL  60
   61 RGVREHAVGE LVQAKTSMVQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [655-845]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENPLTNSLIS FGTMGADYCS IANSVLTAQV TPQQLEISQS LRPGLGPVSG GFPVAASDFR  60
   61 QMLQQNLSAS VGPLDSMRRL RLSRAEGRLE GPTDTLLYGL CGVDPRVGST PLNVGVADMC 120
  121 LSALYLHELN QQKRQARQSR IDEAEDERPG TSHWPPRPPA APSADTGFGS RHTVITSKAA 180
  181 ESTPLLGSIR S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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