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View Structure Prediction Details

Protein: Atg9-PA
Organism: Drosophila melanogaster
Length: 845 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Atg9-PA.

Description E-value Query
Range
Subject
Range
gi|74831738 - gi|74831738|emb|CAJ30200.1| autophagy protein 9 [Drosophila erecta]
1043.0 [0..1] [845..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPHINYRS LAEEAASPFL EHHPSTGQGP SKTQDAKANA AAAHLDPLGE HGLEQPLDEH  60
   61 DTEHEGEDTP RNSGVMIHMV PETGRARWNH IEDLDSFFSR MYQYQQKHGF TVIVVDEMLQ 120
  121 VLEFGFVVWL LAFVMHCVRF DVLFGDTPPG GLNPNKTTLS DVMYPTGECL ANFTWVTYLV 180
  181 VFIAAIYLGI RLLKMVYHIT QYADIKRFYN SALHIEDSDL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNFTWHEVQQ RIRRVQAEQH MCIDKESLTE LDIYHRVLRF KNYLVALMNK QLLPVRFHIP  60
   61 LYGEVVSLSR GMLFNIDFIL FR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [303-468]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPGSPFQNNW QLRDEFAVRS NQTELAQRLS KLILGVALLN LVLAPVIFVW QLIYFSFSYA  60
   61 NILRKEPGAL GLRTWSNYGR LYLRHFNELD HELDARLNRA YDYADRYLNS FSSPLAAVIA 120
  121 KNLLFISGGL LLLILALGIY EEHVFQVEHL LAILAGLGAI GVVCRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [469-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIPDENLVWC PEQLMTAILA HVHYLPSEWR QQAHTTKVRQ EFSNFFQFKA GYLLSEIFSP  60
   61 FVTPFVLIFV FRPKAIELVR FFRTFTVSVR GVGNVCSFAQ MDVRKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [575-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNPDWQLTSE LEEMTRATAQ QPQQEPQQQS LAGGKTEMSL LRFTLNNPEW QMPKEAKQFL  60
   61 RGVREHAVGE LVQAKTSMVQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [655-845]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENPLTNSLIS FGTMGADYCS IANSVLTAQV TPQQLEISQS LRPGLGPVSG GFPVAASDFR  60
   61 QMLQQNLSAS VGPLDSMRRL RLSRAEGRLE GPTDTLLYGL CGVDPRVGST PLNVGVADMC 120
  121 LSALYLHELN QQKRQARQSR IDEAEDERPG TSHWPPRPPA APSADTGFGS RHTVITSKAA 180
  181 ESTPLLGSIR S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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