| Protein: | CG8443-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1448 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8443-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1322.0 | [0..63] | [1402..44] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MALETEAKNS NATATGDATA TATKASGKAK ENNNTAGGKK NLNPNSNQQN SNQNLVNGNG 60
61 TAADGPAAKK KGKKNRNK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-262] |
1 11 21 31 41 51
| | | | | |
1 SPTEPTTEAV LSNGHAEKPT VVDAVEDNAD TNANVEKPQE GGAPDAEADG DDIDLDALQD 60
61 IGITVNISSP GADLLCVQLS SMELVQEIHQ LLMDREETCH RTCFSLQLDN VTLDNFAELK 120
121 SINNLEQGST IKVVEEPYTM REARIHVRHV RDLLKNLDPA DAYNGIDCTS LTYLNTITQG 180
181 DLLD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-402] |
1 11 21 31 41 51
| | | | | |
1 KKRTRPDSVD CTPPEYVTPG VSDPPILPLH PNVKNAKGPQ ALKVLTTSAW NPPPGPRKLH 60
61 GDLMYLYVVT MEDKRFHISA CSKGFFINQS TDDTFNPKPD NPSHLSHSLI DLLSHISPSF 120
121 RRAFQTIQKR RTMRHAFERV
|
| Detection Method: | |
| Confidence: | 2.13 |
| Match: | 1sgoA |
| Description: | NMR Structure of the human C14orf129 gene product, HSPC210. Northeast Structural Genomics target HR969. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.988649793903839 | bayes_pls_golite062009 |
| protein binding | 0.879208011887064 | bayes_pls_golite062009 |
|
Region A: Residues: [403-645] |
1 11 21 31 41 51
| | | | | |
1 ATPYQVYQWA APILEHTVDA IRAEDAFSSK LGYEEHIPGQ TRDWNEELQT TRELPRKTLP 60
61 ERLLRERAIF KVHGDFVTAA TRGAMAVIDG NVLAINPGED TKMQMFIWNN IFFSMGFDVR 120
121 DHYKELGGDA AAFVAPRYDL HGVRVYNAVD IEGLYTLGTV VVDYRGYRVT AQSIIPGILE 180
181 REQEQSVVYG SIDFGKTVLS HPKYLELLRQ AGKHLKILPH VVLNERDEPV ELCSSVECKG 240
241 IIG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [646-831] |
1 11 21 31 41 51
| | | | | |
1 NDGRHYILDL LRTFPPDVNF LKLQDVQLSK ELVDMGFPIE HRHKLCCLRQ ELLEAFIEDR 60
61 HVNFIRIAAA RLQQLTTIKQ SEKSEANPVP ALEGAEAASK VNGAEKPDDK EKKNEEEEKK 120
121 ERSTSGEARA AAIVNAIREA QSNVATSNEV QAAEVVKRAC AAVGSLKEKE FDFRFNPDVF 180
181 SPGIRH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [832-1352] |
1 11 21 31 41 51
| | | | | |
1 ADGEEGTSLA KQKVLVQEAA EFLVLKQIPA FIKEHMSHSS SPIDGQSLTE SLHSHGINVR 60
61 YLGKVIKILS QMPRMDYLHR IAVLELIVRA TKHIYYTYMQ NTEPLHLSAA ISHFLNCLLT 120
121 NGPVNPAVSS EEAHKKRGNG GKHNKHKSSK GGKGQQQQQT TGNQNGSSSG SSNSSSASDW 180
181 TLMTPRSLWQ QIRKEAKVYW DWELDCDSIE TAVSKYGILR ISLMRAFCLK VGIQVLLREY 240
241 NFESKHKPTF GDDDIVNVFP IVKHISPRAT DAYNFYTTGQ AKIQQGLFKE GYELISGALN 300
301 LLNNVFGALH QENGSCLRML ARLSYLLGDA QDALAIQQRA VIMSERVNGM DHPSTILEYT 360
361 HLSLYSFANG HVGMSLKLLY RARYLMVLIC GEDHPEVALI DSNISLILHA LGEYELSLRF 420
421 IEHALKLNLK YFGDKDMHVA LSYHLMARTQ SCMGDFRSAL NNEKETYSFY KSQLGENHEK 480
481 TRDSAECLRL LTQQAVLLQR KMNDIYSSGK LTSDLPPIHI T
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 2ooeA |
| Description: | No description for 2ooeA was found. |
| Term | Confidence | Notes |
| protein binding | 1.65083457326273 | bayes_pls_golite062009 |
| binding | 1.48701537593139 | bayes_pls_golite062009 |
| nucleic acid binding | 0.14122558270332 | bayes_pls_golite062009 |
|
Region A: Residues: [1353-1448] |
1 11 21 31 41 51
| | | | | |
1 PPSMGSVLDM LNTINGILFV KISRKDIVKV RSEIEKHFKT DSTENEVNDA INSIVAAANN 60
61 NGEAEDAVSK DIKEQPEAGK QLTNGDKAAA TEATSS
|
| Detection Method: | |
| Confidence: | 47.30103 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
