| Protein: | fus-PE, fus-PD, ... |
| Organism: | Drosophila melanogaster |
| Length: | 967 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fus-PE, fus-PD, ....
| Description | E-value | Query Range |
Subject Range |
|
|
407.0 | [0..1] | [822..1] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MQVPEHVVSL YIATCGQNGS GLGSDEKEII LLVFVLLEVS TGQIVGTKQI LVRPDGYFIK 60
61 DRTISSSSDN SSVTNNTASS PPLAIGDANN GSGSTSGNGN SLENGSELIL PIAEAQAAGK 120
121 PLSEAIEEFD AYLRSLSLHD TEIKLVTDGQ LPLRQCLHRE ASAKDVELPA YYNRFSDLRK 180
181 EFLRYKSG
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1w0hA |
| Description: | Crystallographic structure of the nuclease domain of 3'hExo, a DEDDh family member, bound to rAMP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.722279828632226 | bayes_pls_golite062009 |
| hydrolase activity | 0.29272620969648 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.24934115119652 | bayes_pls_golite062009 |
| nuclease activity | 0.239989310123501 | bayes_pls_golite062009 |
|
Region A: Residues: [189-256] |
1 11 21 31 41 51
| | | | | |
1 DLARALVPVK DVKKMLQAPT LPMPQSIAEM LGELNISSVE DNDFYIRESR DMVTVIQTLL 60
61 QAGHKFAA
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 2dhsA |
| Description: | No description for 2dhsA was found. |
|
Region A: Residues: [257-508] |
1 11 21 31 41 51
| | | | | |
1 NELVNLVLEP GICSIDDEVD GNCIVRARGL PWQSSDQDIA KFFRGLNVAK GGVALCLSPL 60
61 GRRNGEALIR FVCQEHRDMA LKRHKHHIGT RYIEVYRASG EDFLAIAGGA SNEAQAFLSK 120
121 GAQVIIRMRG LPYDATAKQV LDFFTTGDTP PCHVLDGNEG VLFVKKPDGR ATGDAFVLFA 180
181 NETDAPKALG RHRESIGQRY IELFRSTTAE VQQVLNRSMD PKNYESGGGH SQPPLIAQLP 240
241 TMQLPLLPQV GA
|
| Detection Method: | |
| Confidence: | 55.154902 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [509-727] |
1 11 21 31 41 51
| | | | | |
1 HSLSHSLGAS PANLCPPVPP PALPLPTQHL ITSGTTKNCI RLRGLPYEAM VEHILHFLDD 60
61 FAKHIIYQGV HMVINAQGQP SGEAFIQMDL EESARLCAQR RHNHYMMFGK KYRYIEVFQC 120
121 SGDDMNMVLN GGLASPVAQP PPPHLGHAHK QQSLLAATTG MFSSAGQSPT TVAAGTAQSP 180
181 LGGTHTHTHP HSHAHAHATG HAHAAAAAAH HGLSASSAM
|
| Detection Method: | |
| Confidence: | 3.88 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
|
Region A: Residues: [728-865] |
1 11 21 31 41 51
| | | | | |
1 LPGLSAAASA SGLASFMSAG QQSAAAAAHS AASLQNAAVA LAPQGYALNP FSLPPPGSAA 60
61 AAAASTPALL AQQQAQFIAQ QSLLVRQQAA AAALAAEQQQ QQQQQQQLYA SAMLQQHPLY 120
121 LQQQQQQQQL YASAMLQQ
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [866-967] |
1 11 21 31 41 51
| | | | | |
1 GQPQFVLMQR PSAAYLPPFP LSYMSAAGAA SGVGVAPGAA VAGAAAAASP SASNSSLSQS 60
61 MKRSYENAFQ QEAAGAAAAA SAAKRALTRQ PSSVYSYYNS GI
|
| Detection Method: | |
| Confidence: | 15.30103 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
