| Protein: | unc-5-PA, FBpp03... |
| Organism: | Drosophila melanogaster |
| Length: | 1072 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-5-PA, FBpp03....
| Description | E-value | Query Range |
Subject Range |
|
|
720.0 | [0..1] | [1072..1] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MAVINKAGNV IALLLVKLQL ILLFTLSVSG ELPQLDYGSL SASLEEDAID PLTAMAPFAN 60
61 SLVTEESAQH KNNAELLGNS SEDENVRPQQ GSSSSGLGSS GAAGGSGILL EEFNSGKLSP 120
121 GEASNTLPIF LIEPESVFVV KNRPAVLKCK ASHSLQVIFK CSGSSQPPPS THETHVDPHT 180
181 GVNMEEVTAT IHRDLVDEFF GDGPFKCECH AWSSRGVVKS QAATVHIAYI RKS
|
| Detection Method: |  |
| Confidence: | 31.0 |
| Match: | 2v9qA |
| Description: | No description for 2v9qA was found. |
|
Region A: Residues: [234-602] |
1 11 21 31 41 51
| | | | | |
1 FNQSPTSLRL ELGSRAELRC EPPGGFPEPK LTWHKNNAVI TADSEPGITV SAGTLIFRQV 60
61 ALQHMANYSC SAENIAGRRV SDSAVLIVYV NGGWSTWSPW RECKCAGKPS QGRKRSRTCN 120
121 NPMPLNGGAQ CPGPQIQKSA DCAACPEDTQ IVSPDGFDIS SSKRMARWSA WSDWSICSAE 180
181 CIQVRRRKCL TQGQTQISSE AEEAGDLLLG APGVGMAALI AAAGVGAVGS PSEATGSSSD 240
241 IIPGYGKSLC AGKDIQTAEC RGEQCQIGKD DFDWTLYLGL AFITAVCFAF GTALICCARR 300
301 GIRTNPHYNM ARSVMDADYM PGVVEKKEMR MHIEASNMGY DYVNPGHRYL PGEHIMGMGI 360
361 GCGGVTEHH
|
| Detection Method: | |
| Confidence: | 27.522879 |
| Match: | 1w0rA |
| Description: | Solution structure of dimeric form of properdin by X-ray solution scattering and analytical ultracentrifugation |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [603-819] |
1 11 21 31 41 51
| | | | | |
1 YDVPNLSANY TNPIDHLSVD YLSETGESST ADTSNSTFDM NGKLSILNAS KSSTYEMLGS 60
61 AGGQLRLYGG ELLLFVPEHA IGKHVKKHVS LLLLSDECSR VSCATESSIL CSSVVHSAPR 120
121 NYSFVKPVIL KIPHCLVAPE QWHVHIYHAD SEHDELSVNW RRAVSVGEET INTPMFVQLE 180
181 ATHVFIMTEQ LGHFTVVAEP RIQQPSIKMK LLAFSQH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [820-936] |
1 11 21 31 41 51
| | | | | |
1 TPPSNANCSL RIYVVKDFPN SRDICANVEA KLGGSFLGES QVFAFTLNSR NLNIRVRSAD 60
61 VEAAAPYEHA IPYQHILSNN SILHCEFSLR RQDQNSLCVD FGQGSEDDYY TFNIPAH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [937-1072] |
1 11 21 31 41 51
| | | | | |
1 SMSGSAEELA STTNTTISID RQGNYVNESC VMDFVQLPHA TKRLICGALD PPRADERDWR 60
61 LLAKKLNTDR YIAYFATKAS PTEQILNLWE CRANSSPGSS SNSVSHTIMA LLLTLKEMGR 120
121 QDVLDIIVET IGPLWI
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 1wmgA |
| Description: | Crystal structure of the UNC5H2 death domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.81925838257497 | bayes_pls_golite062009 |
| protein binding | 2.45473206123776 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.79234496253717 | bayes_pls_golite062009 |
| receptor activity | 1.73411211759611 | bayes_pls_golite062009 |
| signal transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| molecular transducer activity | 1.48908901984354 | bayes_pls_golite062009 |
| netrin receptor activity | 1.19822565953592 | bayes_pls_golite062009 |
| protein domain specific binding | 0.8302342819454 | bayes_pls_golite062009 |
| cytokine binding | 0.34960245851041 | bayes_pls_golite062009 |
| death receptor activity | 0.15603114432983 | bayes_pls_golite062009 |
