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View Structure Prediction Details

Protein: FBpp0294039, BEA...
Organism: Drosophila melanogaster
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0294039, BEA....

Description E-value Query
Range
Subject
Range
BEAF-32-PA - The gene Boundary element-associated factor of 32kD is referred to in FlyBase by the symbol Dmel\BEA...
435.0 [0..2] [282..25]
gi|125807968|ref... - GA10120-PA [Drosophila pseudoobscura], GA10120 [Drosophila pseudoobscura pseudoobscura]
gi|125807968, gi... - gi|54635753|gb|EAL25156.1| GA10120 [Drosophila pseudoobscura pseudoobscura], gi|125807968|ref|XP_001...
318.0 [0..2] [282..25]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKGRVSNVW QHYDINEECE NFAICRYCGN NISRGGMASN LKGNNTTNLW THLRHKHRDE  60
   61 VLVSPVQQRP QARM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.38
Match: 2djrA
Description: No description for 2djrA was found.

Predicted Domain #2
Region A:
Residues: [75-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPIIKKDKTV RITKAKTLRE PLRVAKPKIE SNVANYLGEA GALPQKWEEY EQNDEISEDI  60
   61 KDIIYSEDPL CYSPIHVMDD EGLDQPEKQV TVLTHSTSPA GGSSRPIGVG SGVQATVVAS 120
  121 TSSSSSSAKQ LKNNLETSIE RLTAVSEQLS YIIQQNHEEL TKDDDYYFAL SLVPAMRHLS 180
  181 LSRKMYVRSK IQDILFKESE DSTLAKDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle