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View Structure Prediction Details

Protein: Su(var)2-HP2-PB
Organism: Drosophila melanogaster
Length: 1633 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Su(var)2-HP2-PB.

Description E-value Query
Range
Subject
Range
Muc12Ea-PA - The gene Mucin 12Ea is referred to in FlyBase by the symbol Dmel\Muc12Ea (CG32602, FBgn0052602). It ...
412.0 [0..19] [1632..1623]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDIEYLDEY KDLVLPGIKS SAPTASSAGV PRQRRISSDS SNSSSIDADI FQKLFHGKYL  60
   61 DDELLKEGSG SKSQDRRRRP PSPSSSDESN DALEALFCGK SSQSKLSKRR ERYESFDSVD 120
  121 DLGEALMRPS HRLTVPKPST SQAGSKKSQD AAPHRSISNS SSSNIAMSSG QTYACPKNKK 180
  181 TNSVANKTAV SANGDKWASG KNKTVTIVKP QKTDLRPSRL EPKTDPLNLG DLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDSDSDSSYE YESDFYGDQD SDEEDEPVID ISTDTSRTTS VAEAAKRKQR QDVEKSLTGK  60
   61 KEQVKPARRR QLAEVEERPS LKRSKTESEA KSTVQGKYIS IIGNETI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [341-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTTAPIRE TNREAASTSP SARKSAVQEA KHVETTKHII LGPPGKKLLH SDSPAAEVKK  60
   61 PMVQTLLSST LSLQKPSTLD DGSPLKIRKS LKKSIADENI DGDQSIFSSS SVLNKNTSVV 120
  121 APRKVNISVS LLQSKDTQVE TAASSSETPI LTKKEKLKTQ KSTKKPEGNK KTESKKKSLV 180
  181 QGPQMKTQKS EEAVSGPKIL NKYLKSETES SRKTVSTVTG RKQIGQLEVL KKPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [575-691]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRKSEESLVE AISRKKQSQV QRLSKIDGRK SEGTSLPQPD VSKSETALKA ALPKETEFPV  60
   61 QDAEIEKMSK GRGHQNAVKN TKTEQPKSKP KTEVRSLQAE AATELMDSMD SQSDVSD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [692-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRATFPESQG IFNVPGHMTR AISSNRSLAP TPTPMSDSQR NASKERFTPV SDQKKPIRES  60
   61 QTLSKRRARG GRNQPLVSKR KAGEAEDGTA VINPKRPREM DEEDHPQQND HVQESAFAAF 120
  121 PVKITAASSV IPQVVRSTGN TVPQNISPRK LCVKINRRPY NKWLRSTQER NEEQEGSRNV 180
  181 TS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [874-1085]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPLLGETSET DSAAESMSES ILQSQVQSEP AIQPLPASQP DSCTLQASDL RIRESSAQLA  60
   61 PIAAYDSPAA NDSSTSPALD IAPESAQTAK ATLNTALCPS TEKHLPDEPT LLESSKKVAE 120
  121 PQKLQTFQAK CLPVPIPEVK SEPEDIMDEH SPNEPMPMVA AAPATPQPHA ITEDAGPDTI 180
  181 QVNTLGVSTS SRPLELHSIP SASDPDGNPN AI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1086-1286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQTKMYSFLY PKRYKQSYDD VGLDFCCPNL DGPMRAIDFT RLHSKAEVPV LEIPQFLVIT  60
   61 TKFISKADKN MPSKVRAKLE LLDKSKERDS SKLTPTATTP TADPTGPSSF SPAPASVGPA 120
  121 TQPFPSIIQN LLSAPLPDPG LFNHPTTVDP STSTPVVSGS SSSTTISADL DSLSKQLPRG 180
  181 TKLIKKSVQQ VATNPSLAGT S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1287-1526]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVINASPSFI QLPPICPNDK QRVELQARVQ MFDLVLQTLS RRAANLSVAE RQRTIEEIVR  60
   61 TSSLMAIDVD VGTKLLENYV HYLNKATSTM TPLTPAQINS SLGASTSSTL SKSIATSDIP 120
  121 QQGKKISADH AQQRSSLPAT IPLYDGGRNT LGFPYSCSKS TAGRKSSYVA TSTPVKASTS 180
  181 QAAAAAALGN AQPRSTLGIP KSVREDASQF VNLNTTVCMP APRTNAKKKP GTSGPLKSMN 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1527-1633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSPAVQKPAL CKQQTAPART LSKSTVSSVA RAKSTGSLSA VLGETPADEF VSPAGMSLST  60
   61 TGNPNVFIIN HAVQSEESIL PDSNSSVGHM ETTVIKGELD DSAEIII

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle