| Protein: | CG8394-PA |
| Organism: | Drosophila melanogaster |
| Length: | 549 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8394-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..1] | [549..1] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MSFIAKLKAT PLPPLRNILN VAVQTARQQI PERKDYEQPP GSTAQQHHHS QQAQHKAMEA 60
61 GMDGGDTTEM SSNPFRNAGS WTNDGEGGGD GDGEYRNEYQ STSFNEYDGR YQQTDGFRQG 120
121 SIASEGSSFV CEGE
|
| Detection Method: |  |
| Confidence: | 1.18 |
| Match: | 1sa1E |
| Description: | TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.765787959568968 | bayes_pls_golite062009 |
| protein binding | 0.629439947822407 | bayes_pls_golite062009 |
|
Region A: Residues: [135-549] |
1 11 21 31 41 51
| | | | | |
1 GGGGCKIDEF QAAWNVTNAI QGMFIVSLPF AVLHGGYWAI VAMVGIAHIC CYTGKVLVQC 60
61 LYEPDPATGQ MVRVRDSYVA IAKVCFGPKL GARAVSIAQL IELLMTCILY VVVCGDLLAG 120
121 TYPQGSFDSR SWMLFVGIFL LPMGFLKSLK MVSTLSFWCT MSHIVINAVI LGYCLLQIGD 180
181 WGWSKVRFSI DMENFPISLG VIVFSYTSQI FLPTLEGNMI DRSKFNWMLD WSHIAAAVFK 240
241 AGFGYICFLT FQNDTQQVIT NNLHSQGFKG MVNFFLVIKA LLSYPLPYYA ACELLERNFF 300
301 RGPPKTKFPT IWNLDGELKV WGLGFRVGVI VSTILMAIFI PHFSILMGFI GSFTGTMLSF 360
361 IWPCYFHIKI KGHLLDQKEI AKDYLIIGLG VLFGVIGIYD SGNALINAFE IGLPF
|
| Detection Method: | |
| Confidence: | 1.64 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
