| Protein: | pea-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pea-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
925.0 | [0..2] | [1241..14] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MDELQKLEYL SLVSKICTEL DNHLGINDKD LAEFIIDLEN KNRTYDTFRK ALLDNGAEFP 60
61 DSLVQNLQRI INLMRPSRPG GASQEKTVGD K
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [92-263] |
1 11 21 31 41 51
| | | | | |
1 KEDKKSQLLK MFPGLALPND TYSKKEESDD DEKVKAKPEK HSETHKKTDM SDVDAAMMEL 60
61 EALAPGEGAT LVRPHKEVSS RDRHKRRSRD RDTKRRSRSR EDRHSDRRRS RSRDKERRRR 120
121 SRSRDNRRRS RSREDRDRDR DRRHKSSSSR DHHERRRRSR SRSTERRDRR DR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [264-560] |
1 11 21 31 41 51
| | | | | |
1 SRDCSEKMPP PSAAMTDDPE AGKIYSGKIA NIVPFGCFVQ LFGLRKRWEG LVHISQLRAE 60
61 GRVTDVTEVV TRNQTVKVKV MSITGQKVSL SMKEVDQDSG KDLNPLSHAP EDDESLRDRN 120
121 PDGPFSSSTS MLNLQGNGME GDEHESRKRV TRISSPERWE IKQMISSGVL DRSEMPDFDE 180
181 ETGLLPKDED DEADIEIEIV EEEPPFLSGH GRALHDLSPV RIVKNPDGSL AQAAMMQSAL 240
241 SKERREQKML QREQEIEAMP TSLNKNWIDP LPEDESRSLA ANMRGMAAAP PEVPEWK
|
| Detection Method: | |
| Confidence: | 2.76 |
| Match: | 1yz6A |
| Description: | Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [561-959] |
1 11 21 31 41 51
| | | | | |
1 KHVIGGKKSS FGKKTDLTLV EQRQSLPIYK LRDDLIKAVT DNQILIVIGE TGSGKTTQIT 60
61 QYLGECGFTA RGKIGCTQPR RVAAMSVAKR VAEEYGCRLG QEVGYTIRFE DCTSPETIIK 120
121 YMTDGMLLRE CLMEAELKSY SVIMLDEAHE RTIHTDVLFG LLKTAVQKRP ELKLIVTSAT 180
181 LDAVKFSQYF FKAPIFTIPG RTFPVEVLYT KEPETDYLDA SLITVMQIHL REPPGDILLF 240
241 LTGQEEIDTA CEILYERMKS LGPDVPELII LPVYSALPSE MQTRIFDPAP AGSRKVVIAT 300
301 NIAETSLTID GIFYVVDPGF VKQKVYNSKT GMDSLVVTPI SQAAAKQRAG RAGRTGPGKT 360
361 YRLYTERAYR DEMLPTPVPE IQRTNLATTV LQLKTMGIN
|
| Detection Method: | |
| Confidence: | 66.522879 |
| Match: | 2hxyA |
| Description: | No description for 2hxyA was found. |
|
Region A: Residues: [960-1079] |
1 11 21 31 41 51
| | | | | |
1 DLLHFDFMDA PPVESLVMAL EQLHSLSALD DEGLLTRLGR RMAEFPLEPN LSKMLIMSVA 60
61 LQCSDEILTI VSMLSVQNVF YRPKDKQALA DQKKAKFNQA EGDHLTLLAV YNSWKNNKFS 120
121
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.216 | a.39.1 | EF-hand |
| View | Download | 0.240 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.221 | a.118.8 | TPR-like |
|
Region A: Residues: [1080-1242] |
1 11 21 31 41 51
| | | | | |
1 NAWCYENFVQ IRTLKRSQDV RKQLLGIMDR HKLDVVSAGK NSVRIQKAIC SGFFRNAAKK 60
61 DPQEGYRTLV DSQVVYIHPS SALFNRQPEW VIYHELVQTT KEYMREVTTI DPKWLVEFAP 120
121 SFFRFSDPTK LSKFKKNQRL EPLYNKYEEP NAWRISRVRR RRN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
