| Protein: | mam-PB, mam-PA, ... |
| Organism: | Drosophila melanogaster |
| Length: | 1594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mam-PB, mam-PA, ....
| Description | E-value | Query Range |
Subject Range |
|
|
490.0 | [0..261] | [1542..250] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MDAGGLPVFQ SASQAAAVAQ QQQQQQQQQQ QHLNLQLHQQ HLGLHLQQQQ QLQLQQQQHN 60
61 AQAQQQQIQV QQQQQQQQQQ QQQQHSPYNA NLGATGGIAG ITGGNGAGGP TNPGAVP
|
| Detection Method: |  |
| Confidence: | 1.2 |
| Match: | 1rh1A |
| Description: | crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [118-238] |
1 11 21 31 41 51
| | | | | |
1 TAPGDTMPTK RMPVVDRLRR RMENYRRRQT DCVPRYEQAF NTVCEQQNQE TTVLQKRFLE 60
61 SKNKRAAKKT DKKLPDPSQQ HQQQQHQQQQ QHQQHQQHQQ AQTMLAGQLQ SSVHVQQKFL 120
121 K
|
| Detection Method: | |
| Confidence: | 5.154902 |
| Match: | 2f8xM |
| Description: | No description for 2f8xM was found. |
|
Region A: Residues: [239-327] |
1 11 21 31 41 51
| | | | | |
1 RPAEDVDNGP DSFEPPHKLP NNNNNSNSNN NNGNANANNG GNGSNTGNNT NNNGNSTNNN 60
61 GGSNNNGSEN LTKFSVEIVQ QLEFTTSAA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [328-1513] |
1 11 21 31 41 51
| | | | | |
1 NSQPQQISTN VTVKALTNTS VKSEPGVGGG GGGGGGGGSG NNNNNGGGGG GGNGNNNNNG 60
61 GDHHQQQHQQ QQQQQGGGLG GLGNNGRGGG PGGMATGPGG VAGGLGGMGM PPNMMSAQQK 120
121 SALGNLANLV ECKREPDHDF PDLGSLDKDG GGGQFPGFPD LLGDDNSENN DTFKDLINNL 180
181 QDFNPSFLDG FDEKPLLDIK TEDGIKVEPP NAQDLINSLN VKSEGGLGHG FGGFGLGLDN 240
241 PGMKMRGGNP GNQGGFPNGP NGGTGGAPNA GGNGGNSGNL MSEHPLAAQT LKQMAEQHQH 300
301 KNAMGGMGGF PRPPHGMNPQ QQQQQQQQQQ QQQAQQQHGQ MMGQGQPGRY NDYGGGFPND 360
361 FGLGPNGPQQ QQQAQQQQPQ QQHLPPQFHQ QKGPGPGAGM NVQQNFLDIK QELFYSSQND 420
421 FDLKRLQQQQ AMQQQQQQQH HQQQQQQQQP KMGGVPNFNK QQQQQQVPQQ QLQQQQQQQQ 480
481 QQQQQQQQQY SPFSNQNPNA AANFLNCPPR GGPNGNQQPG NLAQQQQQPG AGPQQQQQRG 540
541 NAANGQQNNP NAGPGGNTPN APQQQQQQST TTTLQMKQTQ QLHISQQGGG AHGIQVSAGQ 600
601 HLHLSGDMKS NVSVAAQQGV FFSQQQAQQQ QQQQQPGGTN GPNPQQQQQQ PHGGNAGGGV 660
661 GVGVGVGVGN GGPNPGQQQQ QPNQNMSNAN VPSDGFSLSQ SQSMNFNQQQ QQQAAAQQQQ 720
721 VQPNMRQRQT QAQAAAAAAA AAAQAQAAAN ASGPNVPLMQ QPQVGVGVGV GVGVGVGVGN 780
781 GGVVGGPGSG GPNNGAMNQM GGPMGGMPGM QMGGPMNPMQ MNPNAAGPTA QQMMMGSGAG 840
841 GPGQVPGPGQ GPNPNQAKFL QQQQMMRAQA MQQQQQHMSG ARPPPPEYNA TKAQLMQAQM 900
901 MQQTVGGGGV GVGGVGVGVG VGGVGGANGG RFPNSAAQAA AMRRMTQQPI PPSGPMMRPQ 960
961 HAMYMQQHGG AGGGPRTGMG VPYGGGAGGP MGGPQQQQRP PNVQVTPDGM PMGSQQEWRH1020
1021 MMMTQQQTQM GFGGPGPGGP MRQGPGGFNG GNFMPNGAPN GAAGSGPNAG GMMSGPNVPQ1080
1081 MQLTPAQMQQ QLMRQQQQQQ QQQQQHMGPG AANNMQMQQL LQQQQSGGGG NMMASQMQMT1140
1141 SMHMTQTQQQ ITMQQQQQFV QSTTTTTHQQ QQMMQMGPGG GGGGGG
|
| Detection Method: | |
| Confidence: | 95.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [1514-1594] |
1 11 21 31 41 51
| | | | | |
1 PGSANNNNGG GGGGAAGGGN SASTIASASS ISQTINSVVA NSNDFGLEFL DNLPVDSNFS 60
61 TQDLINSLDN DNFNLQDFNM P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
