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View Structure Prediction Details

Protein: fas-PA, FBpp0308965
Organism: Drosophila melanogaster
Length: 822 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fas-PA, FBpp0308965.

Description E-value Query
Range
Subject
Range
gi|76637952 - gi|76637952|ref|XP_599586.2| PREDICTED: similar to hemicentin 1 [Bos taurus]
440.0 [0..11] [814..571]

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Predicted Domain #1
Region A:
Residues: [1-663]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTFDRRLW ILLFIISVQC TTYTQPQNIN AKSVQKPKPS ERREVISTSS SSSHSWPSIS  60
   61 AEPADEVVDH RGGGKPAKCA KNCQKAKAKW AKWRTQLKPH HQAHRAVQHK EARQRQRRET 120
  121 EEDELDAVLR APSSTSTSTA VATTVQATSS SSSATRSSVI NETKAKRPRS TLHLAPEDMQ 180
  181 PKPKEPVIII DDVEEFDSGT STSDLIARKS REEAEEEEDE GPLEPRVLPL RPVPPNPYEA 240
  241 EEMSVVYAEQ HSEIKLMCEV DLDIATSMWY KNGQVVHAMD RTARVTDYRF IKEANGALTI 300
  301 TNVMLEDDGK WQCEAENTRR YTENARPVKL VVLDRPKPPY LLIDSRRLDA SNLFVPVKEN 360
  361 SELNLACVSE GGNPRPTLTW EVLLSPGVDR HAQKVSAEVL ELEEIKGEKL DKDGYKINSG 420
  421 AKSEARLPAV YRAHHNARIL CVMEHPTLKI RQNASLLLDV QYTPSFAISR TPGFGYPLRE 480
  481 GIEVSLKCDV DSNPPSTPRW QKDDGDTPVP QTGDGFLNFT SIRREHSGWY KCTSRHLNFQ 540
  541 YSSIGYYLSV RFDSVDVTSE PDDQDVSVAA ASHNPNKGQL EVQLGGAVTL QCPQGSLGCW 600
  601 SHLDPISARL RGLGYGSSQP TGQFSLKDVM YQDAGMYKCV GQSPTNKKKL EVLQSVTVSV 660
  661 KGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.221849
Match: 1e07A
Description: Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [664-822]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTVMALNATP VAYPGSPLHL NVEFCANPPA HAARWLHGDR VFTPGNQYGT TVLAYAVKDL  60
   61 PTPFCKEARL TYVSMHERVP RTFYFIVSTP GGVAEAIFNV NFTKRHRQLS NSIDDDEEEE 120
  121 LNRPEQIHFP VFNGSPADGR GWWAVVLALL LVVATTNRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1ry7B
Description: Crystal Structure of the 3 Ig form of FGFR3c in complex with FGF1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.68891223191024 bayes_pls_golite062009
protein binding 0.482552894534257 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle