| Protein: | vg-PA |
| Organism: | Drosophila melanogaster |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vg-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..68] | [377..1442] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MAVSCPEVMY GAYYPYLYGR AGTSRSFYQY ERFNQDLYSS SGVNLAASSS ASGSSHSPCS 60
61 PILPPSVSAN AAAAVAAAAH NSAAAAVAVA ANQASSSGGI GGGGL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-277] |
1 11 21 31 41 51
| | | | | |
1 GGLGGLGGGP ASGLLGSNVV PGSSSVGSVG LGMSPVLSGA AGHSLHSSHR THAHSLAHAH 60
61 THPHSHTHTH THQTKEEDLI VPRSEAEARL VGSQQHQHHN ESSCSSGPDS PRHAHSHSHP 120
121 LHGGGGATGG PSSAGGTGSG GGDGGGTGAI PKNLPALETP MGSGGGGLAG SG
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [278-453] |
1 11 21 31 41 51
| | | | | |
1 QGQAQYLSAS CVVFTNYSGD TASQVDEHFS RALNYNNKDS KESSSPMSNR NFPPSFWNSN 60
61 YVHPIPAPTH HQVSDLYGTA TDTGYATDPW VPHAAHYGSY AHAAHAHAAH AHAYHHNMAQ 120
121 YGSLLRLPQQ YASHGSRLHH DQQTAHALEY SSYPTMAGLE AQVAQVQESS KDLYWF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
