YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: jeb-PA, FBpp0305279
Organism: Drosophila melanogaster
Length: 560 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for jeb-PA, FBpp0305279.

Description E-value Query
Range
Subject
Range
gi|125808934, gi... - gi|54636098|gb|EAL25501.1| GA15598-PA [Drosophila pseudoobscura], gi|125808934|ref|XP_001360926.1| G...
747.0 [0..78] [542..1]

Back

Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCSLAQTLF CVLLIQGGLY ALHLSGNGNG NGNGNGNGEK SLGEAKAVQV PSHPVGPSTG  60
   61 VAAAWQTAPS QQQQHQQHPG GSPPGGGSSP HGHRSAAAAA FDATTVRLNK EIADMAQLER 120
  121 ERLMLLARAK QTAEQPPAGS NHRGHPFIAG RIQMQPSEEL EVGDYPALLQ QAARGYIFGN 180
  181 VQKQPPTP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTLEQDYEQL RDLENRPVKY YGRVVQPAER EEQVEALYEP LHSFGDFDDF SELEQEPQEP  60
   61 HLGEDELLRE LDAYQYHGLE DETLPENPYR TLEQLELGAP DSLQQLFEQE QEQRDAPFKA 120
  121 MHTGKIH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [316-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPGNYNIRVQ QKWARKRNGQ GIAHNPEAEK QLQRQIFAQH FKPQRNGKLS LSANSEATAS  60
   61 KHLKPSTRSG SKDNEKPHSE LGSSASSAVS SATSSSGKQA AGDGLPKQQQ VEQQSQQDKK 120
  121 DPSHKRSGSG SAGSMGSPGG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [456-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYSAQPPISH SIASQLMLRT ARGQRQYDVP QIECPTAMDG MERFACPIPD RQGRYRCIDD  60
   61 HVLCDGFIDC PDGEDEDRRS CMFYKTTKAH LDVLADALLR WARGR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2fcwB
Description: No description for 2fcwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle