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View Structure Prediction Details

Protein: jeb-PA, FBpp0305279
Organism: Drosophila melanogaster
Length: 560 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for jeb-PA, FBpp0305279.

Description E-value Query
Range
Subject
Range
gi|125808934, gi... - gi|54636098|gb|EAL25501.1| GA15598-PA [Drosophila pseudoobscura], gi|125808934|ref|XP_001360926.1| G...
747.0 [0..78] [542..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCSLAQTLF CVLLIQGGLY ALHLSGNGNG NGNGNGNGEK SLGEAKAVQV PSHPVGPSTG  60
   61 VAAAWQTAPS QQQQHQQHPG GSPPGGGSSP HGHRSAAAAA FDATTVRLNK EIADMAQLER 120
  121 ERLMLLARAK QTAEQPPAGS NHRGHPFIAG RIQMQPSEEL EVGDYPALLQ QAARGYIFGN 180
  181 VQKQPPTP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTLEQDYEQL RDLENRPVKY YGRVVQPAER EEQVEALYEP LHSFGDFDDF SELEQEPQEP  60
   61 HLGEDELLRE LDAYQYHGLE DETLPENPYR TLEQLELGAP DSLQQLFEQE QEQRDAPFKA 120
  121 MHTGKIH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [316-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPGNYNIRVQ QKWARKRNGQ GIAHNPEAEK QLQRQIFAQH FKPQRNGKLS LSANSEATAS  60
   61 KHLKPSTRSG SKDNEKPHSE LGSSASSAVS SATSSSGKQA AGDGLPKQQQ VEQQSQQDKK 120
  121 DPSHKRSGSG SAGSMGSPGG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [456-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYSAQPPISH SIASQLMLRT ARGQRQYDVP QIECPTAMDG MERFACPIPD RQGRYRCIDD  60
   61 HVLCDGFIDC PDGEDEDRRS CMFYKTTKAH LDVLADALLR WARGR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2fcwB
Description: No description for 2fcwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle