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View Structure Prediction Details

Protein: gi|21627442, gi|...
Organism: Drosophila melanogaster
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21627442, gi|....

Description E-value Query
Range
Subject
Range
gi|22023997, gi|... - gi|22023997|ref|NP_523701.2| toutatis CG10897-PA, isoform A [Drosophila melanogaster], gi|21627439|g...
259.0 [0..1] [460..2621]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNIPDGDWY CYECVNKATN ERKCIVCGGH RPSPVGKMIY CDLCPRAYHA DCYIPPLLKV  60
   61 PRGKWYCHGC ISRAPPPKKR SAGGTSGSSS KSRRDRDRES GGSAKRRSDN SK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 2e6rA
Description: No description for 2e6rA was found.

Predicted Domain #2
Region A:
Residues: [113-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPAMEHMQQQ QMPLAGGDSH HHHHQQPPSL NSSHDESMNS LPAAPLSPAH SVVSATNYDD  60
   61 QHHANNSVDG SSRFHAHLIP PSNNGTAALL EDVPGGANVM PGVYPVYTPV AAGNFSAGLI 120
  121 NQAPVQPAMP FANVVAMSPR AVTPTRTRTP TPTPAPTPPP PPPTPLLMQA SPTATALHVN 180
  181 ACQSPPQQQH AQLMTMPSPP AIGVGTATNQ MSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [326-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPINIHAIQE AKEKLKQEKK EKHATKKLMK ELAVCKTLLG EMELHEDSWP FLLPVNTKQF  60
   61 PTYRKIIKTP MDLSTIKKKL QDLSYKTRED FCVDVRQIFD NCEMFNEDDS PVGKAGHGMR 120
  121 KFFESRWGEL TDKHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2e7oA
Description: No description for 2e7oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle