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View Structure Prediction Details

Protein: gi|21627442, gi|...
Organism: Drosophila melanogaster
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21627442, gi|....

Description E-value Query
Range
Subject
Range
gi|22023997, gi|... - gi|22023997|ref|NP_523701.2| toutatis CG10897-PA, isoform A [Drosophila melanogaster], gi|21627439|g...
259.0 [0..1] [460..2621]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNIPDGDWY CYECVNKATN ERKCIVCGGH RPSPVGKMIY CDLCPRAYHA DCYIPPLLKV  60
   61 PRGKWYCHGC ISRAPPPKKR SAGGTSGSSS KSRRDRDRES GGSAKRRSDN SK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 2e6rA
Description: No description for 2e6rA was found.

Predicted Domain #2
Region A:
Residues: [113-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPAMEHMQQQ QMPLAGGDSH HHHHQQPPSL NSSHDESMNS LPAAPLSPAH SVVSATNYDD  60
   61 QHHANNSVDG SSRFHAHLIP PSNNGTAALL EDVPGGANVM PGVYPVYTPV AAGNFSAGLI 120
  121 NQAPVQPAMP FANVVAMSPR AVTPTRTRTP TPTPAPTPPP PPPTPLLMQA SPTATALHVN 180
  181 ACQSPPQQQH AQLMTMPSPP AIGVGTATNQ MSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [326-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPINIHAIQE AKEKLKQEKK EKHATKKLMK ELAVCKTLLG EMELHEDSWP FLLPVNTKQF  60
   61 PTYRKIIKTP MDLSTIKKKL QDLSYKTRED FCVDVRQIFD NCEMFNEDDS PVGKAGHGMR 120
  121 KFFESRWGEL TDKHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2e7oA
Description: No description for 2e7oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle