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View Structure Prediction Details

Protein: gi|15292405, gi|...
Organism: Drosophila melanogaster
Length: 683 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15292405, gi|....

Description E-value Query
Range
Subject
Range
gi|76678552 - gi|76678552|ref|XP_583095.2| PREDICTED: similar to Zinc finger protein 268 (Zinc finger protein HZF3...
476.0 [0..26] [607..619]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRERIIDLE ANIERRYLKP PLGSQTGDAH LAVIAQNQHT TTQTQNSASA AAYLLQMQQQ  60
   61 QQQQQLAQQQ QQQQQGSGAG NSLNPSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNERTMALAA AAAASGPGNA TGVANSAVVA GATPCESGSG EPNSGNASPA SNCDSDRDEK  60
   61 VEQIPKGLVQ WRDAVSRSHT TAQLAMALYV LESCVAWDKS IMKANCQFCT SGENEDKLLL 120
  121 CDGCDKGYHT YCFKPKMDNI PDGDWYCYEC VNKATNERKC IVCGGHRPSP VGKMIYCDLC 180
  181 PRAYHADCYI PPLLKVPRGK WYCHGCISRA P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #3
Region A:
Residues: [299-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPKKRSAGGT SGSSSKSRRD RDRESGGSAK RRSDNSKTPA MEHMQQQQMP LAGGDSHHHH  60
   61 HQQPPSLNSS HDESMNSLPA APLSPAHSVV SATNYDDQHH ANNSVDGSSR FHAHLIPPSN 120
  121 NGTAALLEDV PGGANVMPGV YPVYTPVAAG NFSAGLINQA PVQPAMPFAN VVAMSPRAVT 180
  181 PTRTRTPTPT PAPTPPPPPP TPLLMQASPT ATALHVNACQ SPPQQQHAQL MTMPSPPAIG 240
  241 VGTATNQMSP PPINIHAIQE AKEKLKQEKK EKHATKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [576-683]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMKELAVCKT LLGEMELHED SWPFLLPVNT KQFPTYRKII KTPMDLSTIK KKLQDLSYKT  60
   61 REDFCVDVRQ IFDNCEMFNE DDSPVGKAGH GMRKFFESRW GELTDKHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 2e7oA
Description: No description for 2e7oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle