Protein: | en-PB, en-PA |
Organism: | Drosophila melanogaster |
Length: | 552 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for en-PB, en-PA.
Description | E-value | Query Range |
Subject Range |
|
170.0 | [0..1] | [552..1] |
Region A: Residues: [1-259] |
1 11 21 31 41 51 | | | | | | 1 MALEDRCSPQ SAPSPITLQM QHLHHQQQQQ QQQQQQMQHL HQLQQLQQLH QQQLAAGVFH 60 61 HPAMAFDAAA AAAAAAAAAA AHAHAAALQQ RLSGSGSPAS CSTPASSTPL TIKEEESDSV 120 121 IGDMSFHNQT HTTNEEEEAE EDDDIDVDVD DTSAGGRLPP PAHQQQSTAK PSLAFSISNI 180 181 LSDRFGDVQK PGKSMENQAS IFRPFEASRS QTATPSAFTR VDLLEFSRQQ QAAAAAATAA 240 241 MMLERANFLN CFNPAAYPR |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [260-452] |
1 11 21 31 41 51 | | | | | | 1 IHEEIVQSRL RRSAANAVIP PPMSSKMSDA NPEKSALGSL CKAVSQIGQP AAPTMTQPPL 60 61 SSSASSLASP PPASNASTIS STSSVATSSS SSSSGCSSAA SSLNSSPSSR LGASGSGVNA 120 121 SSPQPQPIPP PSAVSRDSGM ESSDDTRSET GSTTTEGGKN EMWPAWVYCT RYSDRPSSGP 180 181 RYRRPKQPKD KTN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [453-552] |
1 11 21 31 41 51 | | | | | | 1 DEKRPRTAFS SEQLARLKRE FNENRYLTER RRQQLSSELG LNEAQIKIWF QNKRAKIKKS 60 61 TGSKNPLALQ LMAQGLYNHT TVPLTKEEEE LEMRMNGQIP |
Detection Method: | |
Confidence: | 26.0 |
Match: | 1homA |
Description: | DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
nucleic acid binding | 4.20953772435302 | bayes_pls_golite062009 |