| Protein: | skf-PB |
| Organism: | Drosophila melanogaster |
| Length: | 556 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for skf-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
412.0 | [0..1] | [556..1] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MLEAVMASDI NWDPALSKLI STLKESENLS NDQEIDFLKA LLESKELNAL VNVHTKVAKV 60
61 GRDD
|
| Detection Method: |  |
| Confidence: | 3.30103 |
| Match: | 1vf6A |
| Description: | 2.1 Angstrom crystal structure of the PALS-1-L27N and PATJ L27 heterodimer complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.18270433521719 | bayes_pls_golite062009 |
| binding | 2.4093171025758 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.9239399157391 | bayes_pls_golite062009 |
| PDZ domain binding | 1.88298566187849 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.84086757311516 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.80396483614769 | bayes_pls_golite062009 |
| protein binding | 1.15557714383339 | bayes_pls_golite062009 |
| protein domain specific binding | 0.683298345987 | bayes_pls_golite062009 |
| catalytic activity | 0.304516551414824 | bayes_pls_golite062009 |
| structural molecule activity | 0.248599616863115 | bayes_pls_golite062009 |
|
Region A: Residues: [65-236] |
1 11 21 31 41 51
| | | | | |
1 RLAPVLSTSA QVLYEVLEQL SQHCHLNDDC KEAFHLLQDS HLQHLLFAHD AIAQKDFYPH 60
61 LPEAPVEMDE DEETIKIVQL VKSNEPLTGA QSTEPIVGAT IKTDEESGKI IIARIMHGGA 120
121 ADRSGLIHVG DEVIEVNNIN VEGKTPGDVL TILQNSEGTI TFKLVPADNK GA
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1z87A |
| Description: | solution structure of the split PH-PDZ Supramodule of alpha-Syntrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [237-556] |
1 11 21 31 41 51
| | | | | |
1 QRESKVRVRA HFDYNPDVDP YIPCKEAGLA FQRGDVLHIV AQDDAYWWQA RKEHERSARA 60
61 GLIPSRALQE RRILHDRTQK NGTDLDSKQN DDFDREQIAT YEEVAKLYPR PGVFRPIVLI 120
121 GAPGVGRNEL RRRLIARDPE KFRSPVPYTT RPMRTGEVAG REYIFVAREK MDADIEAGKF 180
181 VEHGEYKGHL YGTSAESVKS IVNAGCVCVL SPHYQAIKTL RTAQLKPFLI HVKPPELDIL 240
241 KATRTEARAK STFDEANARS FTDEEFEDMI KSAERIDFLY GHFFDVELVN GELVNAFEQL 300
301 VQNVQRLENE PVWAPSMWVQ
|
| Detection Method: | |
| Confidence: | 45.09691 |
| Match: | 1jxmA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
