YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Prx2540-1-PA
Organism: Drosophila melanogaster
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Prx2540-1-PA.

Description E-value Query
Range
Subject
Range
REHYA_ORYSJ - 1-Cys peroxiredoxin A OS=Oryza sativa subsp. japonica GN=Os07g0638300 PE=2 SV=1
REHY_ORYSA - Probable peroxiredoxin (EC 1.11.1.15) (Thioredoxin peroxidase) (RAB24 protein) - Oryza sativa (Rice)
226.0 [0..1] [218..4]
gi|12044363 - gi|12044363|gb|AAG47823.1|AF311879_1 1-cys peroxiredoxin DPx-2540-1 [Drosophila melanogaster]
225.0 [0..1] [220..1]
gi|50897519 - gi|50897519|gb|AAT85822.1| putative peroxiredoxin [Glossina morsitans morsitans]
225.0 [0..1] [220..1]
gi|54635989, gi|... - gi|54635989|gb|EAL25392.1| GA11614 [Drosophila pseudoobscura pseudoobscura], gi|125808647|ref|XP_001...
gi|125808647|ref... - GA11614-PA [Drosophila pseudoobscura], GA11614 [Drosophila pseudoobscura pseudoobscura]
gi|194110325, gi... - gi|195151085|ref|XP_002016478.1| GL11593 [Drosophila persimilis], gi|194110325|gb|EDW32368.1| GL1159...
223.0 [0..1] [220..1]
gi|19423862 - gi|19423862|gb|AAL88710.1|AF484696_1 1-cys peroxiredoxin [Xerophyta viscosa]
222.0 [0..1] [217..4]
gi|147902026, gi... - gi|32450305|gb|AAH54309.1| MGC64582 protein [Xenopus laevis], gi|147902026|ref|NP_001082669.1| hypot...
222.0 [0..1] [217..4]

Back

Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGQTVPNF EADTTKGPIK FHEWQGNSWV VLFSHPADFT PVCTTELGRI AVHQPEFAKR  60
   61 NTKCLAHSVD ALNSHVDWVN DIKSYCLDIP GDFPYPIIAD PTRDLAVTLG MLDEEQKKDP 120
  121 EVGKTIRALF IISPDHKVRL SMFYPMSTGR NVDEILRTID SLQLTDRLKV VATPANWTPG 180
  181 TKVMILPTVT DEEAHKLFPK GFDKVSMPSG VNYVRTTENY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 1prxA
Description: HorF6 peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.8464796631544 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
selenium binding 2.35334277406288 bayes_pls_golite062009
transcription regulator activity 2.30799114442278 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 2.23310780102446 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
protein disulfide oxidoreductase activity 1.47769936616412 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
transferase activity 1.26687471229876 bayes_pls_golite062009
binding 1.25802922431343 bayes_pls_golite062009
protein binding 1.18479617596618 bayes_pls_golite062009
molecular transducer activity 1.11518182894524 bayes_pls_golite062009
signal transducer activity 1.11518182894524 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
peptide binding 0.374493676068876 bayes_pls_golite062009
0.359224524631956 bayes_pls_golite062009
NADH dehydrogenase activity 0.23291471505999 bayes_pls_golite062009
alkyl hydroperoxide reductase activity 0.21601252862268 bayes_pls_golite062009
copper ion binding 0.178842772364502 bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity 0.16328723676608 bayes_pls_golite062009
NADH dehydrogenase (quinone) activity 0.0434052164026002 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle