| Protein: | Rme-8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2408 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rme-8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
3337.0 | [0..1] | [2408..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MLPPKENVDL ECFLVTKHSW KGRYKRILSI GTAGISTYNP DKLDLTNRWS YSDIVAAAPS 60
61 KTTNIPHDFV ITIKKDKKLD TIKLSSEYRN DILSSILKYY KEFADK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [107-248] |
1 11 21 31 41 51
| | | | | |
1 PKNAQRFSAY KYHWSGISLP TVLEVTPCSL DQLDPTTNDV LASYMYKDIE GIIAGISDYE 60
61 GGIVMAYGGF SRLHLFKALN HHEIVQNIAQ RSAQFLGIET KILKSQITLE QFERQRFGKF 120
121 SGDQFQTSST EFSVHKITPR HP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [249-327] |
1 11 21 31 41 51
| | | | | |
1 DPVKRILCLT EVTLLERDPQ TYSVCTLRPL TDVFALVRDK DNLQRFSIEY KNGIVRNYST 60
61 NDRDSLLATV LDAVRSSGN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [328-488] |
1 11 21 31 41 51
| | | | | |
1 QDVHVRIGNT PRGKRYVPLN SSVDEETEAN LMRLVINNFQ NPSKRYEILE RFNANVPHSG 60
61 LNYSVTQDSL FAENKDKLIL SALQALAQKE LDSPTAQLSN LELEAIFHAL TRLLASKVGY 120
121 AAFTNLPGFR EIIGTKVVAA LRRKDLAVTY SAIDMINSLM H
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [489-630] |
1 11 21 31 41 51
| | | | | |
1 SVNSDHDLKQ EQLNKSSILS SKSFLETLLN MWTTHVSHGS GALVLSAMLD FMTFALCVPY 60
61 SETTDGKQFD TLLELVADRG RYLYKLFQHP SLAIVKGAGL VLRAIIEEGE LQVAQQMQAL 120
121 ALDEAALCRH LLVALYTPSN DP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [631-861] |
1 11 21 31 41 51
| | | | | |
1 TQTTQRQLSR HLIGLWLTDS EEAMELFKRI FPAGLLTFLE SEETVPESDV EEDKLNFRDN 60
61 LKFAIQHSNK TRKNVIEKHL QGIKHWGMNL IEKQDGAAQA LKNRPVVLRN RRQKKKTSDV 120
121 VVNLPFFFYS FAKDHSLPNL IWNHKTREEL RMCLENELRQ FLNDRDLAGQ MIVAWNYQEF 180
181 EVAYQCLADE IKIGDYYIRL ILEKDDWPQN LVKDPIELFN ALYRRVLCRQ R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [862-955] |
1 11 21 31 41 51
| | | | | |
1 VNDDQMTVFS LQALAKVYRR YHAEIGKFND MSYILQLSDR CLSPSMRDAL INLISCLVLE 60
61 KSNSRALIDH VQCLVDLITL AHLHKGRAQL NTKT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [956-1037] |
1 11 21 31 41 51
| | | | | |
1 NVIEAGPNMG TYEEKDWYYN IEKDGQKPER QGPITYSELK ELWQKGLITP KTRCWAIGMD 60
61 GWRSLQQIPQ LKWCLIAKGT PL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1038-1294] |
1 11 21 31 41 51
| | | | | |
1 YDETELSSKI LDILIKCTSF FPSRTQNGVA VLIPGPKLSR KLSEFICLPH VVQVCLTHDP 60
61 GLLERVATLL YQIMEDNPEM PKVYLTGVFY FMLMYTGSNI LPITRFLKMT HMKQGFRSEE 120
121 TSQSGIMHRS ILGQLLPEAM VCFLENYSAE KFAEIFLGEF DTPEVIWSSE MRRLLIEKIA 180
181 AHIADFTPRL RGHTMARYPY LAIPVISYPQ LENELFCHIY YLRHLCDTQK FPNWPISDPV 240
241 QLLKHTLDAW RKEVEKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1295-1405] |
1 11 21 31 41 51
| | | | | |
1 PPQMTIQQAY QDLGIDLTKT PKPDESMIRK SYYKLAQMYH PDKNPNGREI FEKVNQAYEF 60
61 LCSRNVWSSG GPDPNNIVLI LRTQSILFER YPDVLRPYKY AGYPQLIKTI R
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.58214482002828 | bayes_pls_golite062009 |
| protein binding | 1.37672975699838 | bayes_pls_golite062009 |
|
Region A: Residues: [1406-1621] |
1 11 21 31 41 51
| | | | | |
1 LETRDDELFS KEAQLLTAAS ELCYHTVHCS ALNAEELRRE EGIEALLEAY TRCVSILGVD 60
61 SKPDSLHYQV ISNVTRCFEV ACNFEKCKQK IIQLPQLLSD VCRVVYFKHT LSVSLVTSLA 120
121 ANNYDLQCQL SRNGVLWSLL LFIFEYDYTL DESGVDVSDK SNQQQLANNL AKMAVLGCIA 180
181 LAGYSMELRQ KPVTGSETNS PAAKAPPVIK PKPSVS
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.68064826625864 | bayes_pls_golite062009 |
| protein binding | 1.3466202387299 | bayes_pls_golite062009 |
|
Region A: Residues: [1622-1774] |
1 11 21 31 41 51
| | | | | |
1 AASSSTYTQN AHNPLQSKQL AITSGKEKES DTSSGSSDTA SSTPTESEQQ QQLTKTRTSA 60
61 IQQKYIVTGE AKNSLIKQVL DRLLTRYISN QLATVRDSDV LKLLTANTRN PYLIWDNGTR 120
121 AQLKDFLEQQ RTASAKETHE DIAQVSELVS SFE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1775-1828] |
1 11 21 31 41 51
| | | | | |
1 FDAHKDELQI GGIFIRIYND MPTHPIAQPK LFIMDLLEYL KHAYQFLQYK KNPA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1829-2055] |
1 11 21 31 41 51
| | | | | |
1 STAAPVNATP KMGNDGILTP TLAPNHPQLQ QASTGKSGTT FDEVLTAYNR SKSRKKLETD 60
61 ALTEQQLALQ QSKYDFSSDG KIELHITMVL KALIAVIKAN AEVEIQCIGN FDMIFGFLAS 120
121 NIFPDNSTVK AVALEVVSLV SRNKECVSEV AACEILGNYL VALKDPELRA SQVKVLETLS 180
181 GLMNVQEMIK EAQAKGATIY LLDMFCNSRN PQIREMCAGI LAKMTAD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2056-2132] |
1 11 21 31 41 51
| | | | | |
1 RLSGPKVRIT VSKFLPALFI DAMVESPATS VQLFESIHEH PELIWNDTTR SNVCDAVADT 60
61 CQRFYQLQKA NSRHVWK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2133-2294] |
1 11 21 31 41 51
| | | | | |
1 DPEILKDIVS NEIVVAGVYL RLFVSNPAWT LRKPKQFLSD LLDFVVEQIG KSSSEQDVLD 60
61 LSTTALVELL RSQPNLADDI PVLGHIPKLF NLLSVQPKNT LSVLHQLSLS EFCVSAISQT 120
121 ECVAPLKKCM EHNRDCIEKA CEALSRLFKH QHDSLISQSL EV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2295-2408] |
1 11 21 31 41 51
| | | | | |
1 GLIPFLLGLL DSRLEFVDNP SAVKAQIVAA LKGMTHNLNY GDRVTQILLK HPVWAEFKDQ 60
61 RHDLFIADTT IRGYLTGVNP TAGYLTAGPA QSVEVLTSPP PIDRDDPSAR PPID
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
