| Protein: | babo-PA |
| Organism: | Drosophila melanogaster |
| Length: | 601 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for babo-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
452.0 | [0..1] | [601..1] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MLSALRLIFL GALLGASVCA SPIEFVMDTS LNGSRSDPAT ATHPGKWPPT TKAPALRAPA 60
61 GTAGHAYQSP SSSLAADNRS HDNNNASAVS MLLPQDGD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-254] |
1 11 21 31 41 51
| | | | | |
1 ASGAVAPAVT PQLPIYIAQP SAKKPENKIK CHCDTCKESN NICETDGFCF TSVEKNSDGS 60
61 IIFSYSCMVV KYNMQRSKPF ECLTSNERFD TYRIDCCKSD FCNKNEIMKR IFETDYVPHR 120
121 LTSWEFVAII LGATLFICFT GTSTWYYCQR RKRMAS
|
| Detection Method: | |
| Confidence: | 4.09691 |
| Match: | 1rewC |
| Description: | Structural refinement of the complex of bone morphogenetic protein 2 and its type IA receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transmembrane receptor protein serine/threonine kinase binding | 6.65587066706146 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 6.65587066706146 | bayes_pls_golite062009 |
| transforming growth factor beta binding | 2.91714500246524 | bayes_pls_golite062009 |
| receptor activity | 2.74055213309696 | bayes_pls_golite062009 |
| U-plasminogen activator receptor activity | 2.67622889349209 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 2.63843756028069 | bayes_pls_golite062009 |
| signal transducer activity | 2.51859905018984 | bayes_pls_golite062009 |
| molecular transducer activity | 2.51859905018984 | bayes_pls_golite062009 |
| binding | 2.42849959483419 | bayes_pls_golite062009 |
| protein binding | 2.27773193148456 | bayes_pls_golite062009 |
| growth factor binding | 2.11370016324137 | bayes_pls_golite062009 |
| SMAD binding | 2.11166655078306 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.93573786819729 | bayes_pls_golite062009 |
| type I transforming growth factor beta receptor binding | 1.8615627852658 | bayes_pls_golite062009 |
| polysaccharide binding | 1.72562399286061 | bayes_pls_golite062009 |
| cytokine binding | 1.30600639196836 | bayes_pls_golite062009 |
| receptor binding | 0.899783960746717 | bayes_pls_golite062009 |
| enzyme binding | 0.61951403712284 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.227519165953748 | bayes_pls_golite062009 |
| pattern binding | 0.21003196804615 | bayes_pls_golite062009 |
|
Region A: Residues: [255-601] |
1 11 21 31 41 51
| | | | | |
1 GRTFAKEDSA YDPILNGNTT IHDIIEMTTS GSGSAGLPLL VQRSIARQVQ LCHVIGKGRF 60
61 GEVWRGRWRG ENVAVKIFSS REECSWFREA EIYQTVMLRH ENILGFIAAD NKDNGTWTQL 120
121 WLVTDYHENG SLFDYLTTHP VDTNTMLNMS LSIATGLAHL HMDIVGTRGK PAIAHRDLKS 180
181 KNILVKSNLS CAIGDLGLAV RHVEKNDSVD IPSTHRVGTK RYMAPEVLDE SMNDQHFDSY 240
241 KRADVYAFGL ILWEIARRCN MGMIYDEYQL PYYDVVQPDP SIEEMKKVVC IEKCRPNIPN 300
301 RWHASDVLHN MAKVMKECWY PNPVARLTAL RIKKTLASIS VEDKVKN
|
| Detection Method: | |
| Confidence: | 74.69897 |
| Match: | 1b6cB |
| Description: | Type I TGF-beta receptor R4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
